BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00047725
         (849 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD32950.1| putative non-LTR retroelement reverse transcripta...    52   5e-13
gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold ...    60   4e-09
ref|XP_002523454.1| RNA binding protein, putative [Ricinus commu...    42   1e-07
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    42   5e-07
gb|AEJ07916.1| putative ZmL1 non-LTR retrotransposon protein [Ze...    60   6e-07

>gb|AAD32950.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 773

 Score = 51.6 bits (122), Expect(3) = 5e-13
 Identities = 32/103 (31%), Positives = 45/103 (43%)
 Frame = +2

Query: 2   KIFNNRDAEAIL*IPISRLGRKDRLVWQHTSRCNYTVESAYKCLAKQRQQYRFXXXXXXX 181
           K+ +  D   I  I  S  G  D + W +T   NY+V+S Y  L K  QQ +        
Sbjct: 432 KLIHQNDIPHIRAIRPSITGANDAITWIYTHDGNYSVKSGYHLLRKLSQQ-QHASLPSPN 490

Query: 182 XXXXXXXXXXVWNLNIKGKIKHFLWQAYHNILATLVQLGKKKL 310
                     +W  N   KIKHF W++ HN L T   L +++L
Sbjct: 491 EVSAQTVFTNIWKQNAPPKIKHFWWRSAHNALPTAGNLKRRRL 533



 Score = 43.9 bits (102), Expect(3) = 5e-13
 Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
 Frame = +3

Query: 357 CRKAKLVWELSPV-I*DGIQHLSQDFKSWLEQVYTLGQQKEQKNKIELSSYILWSIWKMR 533
           CR +K +WE + + +  G   +S  F   LE +  L Q    +  + L  +I W IWKMR
Sbjct: 556 CRVSKEIWEQAHIKLCPGDSLMSNSFNQNLESIQKLNQSA--RKDVSLFPFIGWRIWKMR 613

Query: 534 NAWYFSSINYTELEVMERA---QMEWQE 608
           N   F++  ++  + +++A   Q +W+E
Sbjct: 614 NDLIFNNKRWSIPDSIQKALIDQQQWKE 641



 Score = 24.6 bits (52), Expect(3) = 5e-13
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 298 KKKIEIDDICKGCGEAKE 351
           ++++  DD C+ CGEA E
Sbjct: 530 RRRLITDDTCQRCGEASE 547


>gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 355

 Score = 59.7 bits (143), Expect(2) = 4e-09
 Identities = 34/103 (33%), Positives = 51/103 (49%)
 Frame = +2

Query: 5   IFNNRDAEAIL*IPISRLGRKDRLVWQHTSRCNYTVESAYKCLAKQRQQYRFXXXXXXXX 184
           IFN +DA AIL IP+      D  +W+ T+  NYTV+SAY+  +     +          
Sbjct: 57  IFNPQDAAAILSIPLHNRLLSDTRIWKTTTTGNYTVKSAYRICSDLLHPH--------DS 108

Query: 185 XXXXXXXXXVWNLNIKGKIKHFLWQAYHNILATLVQLGKKKLK 313
                    +WNLNI  +++ FLW+  HN L T V L  + ++
Sbjct: 109 AHNNSSWMNIWNLNIPHRVRAFLWRLAHNCLPTRVNLNARGIQ 151



 Score = 27.7 bits (60), Expect(2) = 4e-09
 Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
 Frame = +3

Query: 357 CRKAKLVWELSP--VI*DGIQHLSQDFKSWL-EQVYTLGQQKEQKNKIELSSYILWSIWK 527
           C KA   W+     V+   +  L+ +F + L + ++ L  Q++Q      +  +LWS+WK
Sbjct: 173 CAKAMDCWKNIGLHVVLSELLPLANNFTTLLFDFMHRLCSQQQQA-----AGMLLWSLWK 227

Query: 528 MRNAWYFSSINYTELEVMERAQ 593
            RN   + S + T    + RA+
Sbjct: 228 SRNIKLWDSTDTTTAITISRAK 249


>ref|XP_002523454.1| RNA binding protein, putative [Ricinus communis]
           gi|223537282|gb|EEF38913.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 446

 Score = 42.0 bits (97), Expect(3) = 1e-07
 Identities = 27/103 (26%), Positives = 42/103 (40%)
 Frame = +2

Query: 8   FNNRDAEAIL*IPISRLGRKDRLVWQHTSRCNYTVESAYKCLAKQRQQYRFXXXXXXXXX 187
           F+ +DAEAIL I  S     D   W H++   ++  S Y         +           
Sbjct: 66  FSQQDAEAILQIKPSHRKSPDVRYWVHSNSGIFSSRSTYYIAWNSLLNFT----PPSTSH 121

Query: 188 XXXXXXXXVWNLNIKGKIKHFLWQAYHNILATLVQLGKKKLKL 316
                    W LNI   +KHF+W+  HN+L  +  L  +K+ +
Sbjct: 122 GTAPVVNKCWRLNILHGVKHFMWRLNHNLLPCIENLKNRKIDM 164



 Score = 35.0 bits (79), Expect(3) = 1e-07
 Identities = 15/56 (26%), Positives = 30/56 (53%)
 Frame = +3

Query: 423 QDFKSWLEQVYTLGQQKEQKNKIELSSYILWSIWKMRNAWYFSSINYTELEVMERA 590
           +D K+W+ Q++++G      + IE  + +LW  W +RN + F       +  ++RA
Sbjct: 207 EDLKNWVNQIHSVGDD----DFIEKFAMLLWCYWNLRNKFIFERKEEDVVTTVQRA 258



 Score = 24.6 bits (52), Expect(3) = 1e-07
 Identities = 12/46 (26%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = +1

Query: 301 KKIEIDDICKGCG---EAKEFIVERLSWYGNYLRSYEMVYNTCLRI 429
           +KI++ +IC  CG   E + ++ ++      ++RS+ + Y   LR+
Sbjct: 160 RKIDMGEICSRCGGCVETQTYVFKKC----QFVRSFWLTYPLGLRV 201


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 42.0 bits (97), Expect(2) = 5e-07
 Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
 Frame = +3

Query: 357  CRKAKLVWELSPVI*DGIQHLSQDFKSWLEQVYTLGQQKEQKNKIELSSYILWSIWKMRN 536
            C ++   W +SP+        +  F+ W+E +    +  E      L   I W+IW  RN
Sbjct: 1109 CDESSRAWYISPLRIHTGNIEAGSFRIWVESLLDTHKDTEWW---ALFWMICWNIWLGRN 1165

Query: 537  AWYFSSINYTELEVMERAQMEWQEFRGLISQEDDMETVNS--RGWA 668
             W F        EV+ERA     EF    +    +ET+N+   GW+
Sbjct: 1166 KWVFEKKKLAFQEVVERAVRGVMEFEEECAHTSPVETLNTHENGWS 1211



 Score = 38.1 bits (87), Expect(2) = 5e-07
 Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
 Frame = +2

Query: 5    IFNNRDAEAIL*IPISRLGRKDRLVWQHTSRCNYTVESAYKC-LAKQRQQYRFXXXXXXX 181
            +F   ++ AI  IP++   + D+ +W  +    +TV SAY   L + R+           
Sbjct: 989  LFQPWESTAIQRIPVALQKKPDQWMWMMSKNGQFTVRSAYYHELLEDRKT-----GPSTS 1043

Query: 182  XXXXXXXXXXVWNLNIKGKIKHFLWQAYHNILATLVQLGKKKLKL 316
                      +W   I  K+K F W+A HN LA    + K+ + +
Sbjct: 1044 RGPNLKLWQKIWKAKIPPKVKLFSWKAIHNGLAVYTNMRKRGMNI 1088


>gb|AEJ07916.1| putative ZmL1 non-LTR retrotransposon protein [Zea mays]
          Length = 472

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 31/103 (30%), Positives = 50/103 (48%)
 Frame = +2

Query: 8   FNNRDAEAIL*IPISRLGRKDRLVWQHTSRCNYTVESAYKCLAKQRQQYRFXXXXXXXXX 187
           F   DA+ IL IPI   G +D L W    + N++V+SAY   +++R  +           
Sbjct: 87  FLQEDADCILAIPIQE-GMEDTLAWHGDPKGNFSVKSAYALASRRRDHHNNADASSSISG 145

Query: 188 XXXXXXXXVWNLNIKGKIKHFLWQAYHNILATLVQLGKKKLKL 316
                   +WN+N+  KIK FLW+  HN     V + ++ +K+
Sbjct: 146 RGENVWKSIWNVNVTNKIKMFLWRLAHNSHPVRVNIARRGIKI 188