BLASTX nr result

ID: Cephaelis21_contig00047716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00047716
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA93856.1| retrotransposon protein, putative, Ty3-gypsy subc...    70   1e-10
gb|ABB47421.1| retrotransposon protein, putative, Ty3-gypsy subc...    69   4e-10
gb|ABA97413.1| retrotransposon protein, putative, unclassified [...    69   4e-10
gb|AAM01075.1|AC092748_13 Hypothetical protein with similarity t...    69   4e-10
gb|AAT77305.1| putative polyprotein [Oryza sativa Japonica Group]      68   9e-10

>gb|ABA93856.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1427

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/73 (43%), Positives = 50/73 (68%)
 Frame = +2

Query: 2    YNDKLRNTQLSPGDLVLRKNSASRTEGSKKLDPTWEGPYRVREAYRSGSYKLETMEGK*I 181
            YN K+R T+L PG LVLRK +     G  KL+  WEGPY ++   R+GS++L T+EGK +
Sbjct: 1356 YNKKVRPTELMPGHLVLRKKADPVAVG--KLESKWEGPYLIKHKSRTGSFRLATLEGKEV 1413

Query: 182  PRAWHISNLRQFF 220
              +W+ ++L++F+
Sbjct: 1414 DHSWNATSLKRFY 1426


>gb|ABB47421.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 678

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/73 (42%), Positives = 50/73 (68%)
 Frame = +2

Query: 2   YNDKLRNTQLSPGDLVLRKNSASRTEGSKKLDPTWEGPYRVREAYRSGSYKLETMEGK*I 181
           YN K+R+T+L PG LVLRK +     G  KL+  WEGPY ++   R+GS++L T+EG+  
Sbjct: 607 YNKKVRSTELMPGHLVLRKKANPVAVG--KLESKWEGPYLIKHKSRTGSFRLATLEGEEF 664

Query: 182 PRAWHISNLRQFF 220
             +W+ ++L++F+
Sbjct: 665 DHSWNANSLKRFY 677


>gb|ABA97413.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 347

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/73 (43%), Positives = 49/73 (67%)
 Frame = +2

Query: 2   YNDKLRNTQLSPGDLVLRKNSASRTEGSKKLDPTWEGPYRVREAYRSGSYKLETMEGK*I 181
           YN K+R T+L PG LVLRK +     G  KL+  WEGPY ++   R+GS++L T+EGK  
Sbjct: 276 YNKKVRPTELFPGHLVLRKKANPVAVG--KLESKWEGPYLIKHRSRTGSFRLATLEGKEF 333

Query: 182 PRAWHISNLRQFF 220
             +W+ ++L++F+
Sbjct: 334 DHSWNAASLKRFY 346


>gb|AAM01075.1|AC092748_13 Hypothetical protein with similarity to putative retroelement
           [Oryza sativa Japonica Group]
          Length = 818

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/73 (42%), Positives = 50/73 (68%)
 Frame = +2

Query: 2   YNDKLRNTQLSPGDLVLRKNSASRTEGSKKLDPTWEGPYRVREAYRSGSYKLETMEGK*I 181
           YN K+R+T+L PG LVLRK +     G  KL+  WEGPY ++   R+GS++L T+EG+  
Sbjct: 747 YNKKVRSTELMPGHLVLRKKANPVAVG--KLESKWEGPYLIKHKSRTGSFRLATLEGEEF 804

Query: 182 PRAWHISNLRQFF 220
             +W+ ++L++F+
Sbjct: 805 DHSWNANSLKRFY 817


>gb|AAT77305.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 986

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 31/73 (42%), Positives = 49/73 (67%)
 Frame = +2

Query: 2    YNDKLRNTQLSPGDLVLRKNSASRTEGSKKLDPTWEGPYRVREAYRSGSYKLETMEGK*I 181
            YN K+R T+L PG LVLRK +     G  KL+  WEGPY ++   R+GS++L T+EG+  
Sbjct: 915  YNKKVRPTELMPGHLVLRKKANPLAVG--KLESKWEGPYIIKHKSRTGSFRLATLEGEEF 972

Query: 182  PRAWHISNLRQFF 220
              +W+ ++L++F+
Sbjct: 973  DHSWNAASLKRFY 985


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