BLASTX nr result

ID: Cephaelis21_contig00047622 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00047622
         (742 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEB71567.1| RTL5-like protein [Solanum chacoense]                   84   3e-14
ref|XP_002299860.1| predicted protein [Populus trichocarpa] gi|2...    59   1e-06
ref|XP_002314165.1| predicted protein [Populus trichocarpa] gi|2...    57   4e-06
ref|NP_565910.1| protein rotundifolia like 8 [Arabidopsis thalia...    57   5e-06
gb|AEX12455.1| hypothetical protein 2_3237_01 [Pinus taeda] gi|3...    56   7e-06

>gb|AEB71567.1| RTL5-like protein [Solanum chacoense]
          Length = 109

 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 51/128 (39%), Positives = 61/128 (47%), Gaps = 2/128 (1%)
 Frame = +2

Query: 74  MQYYMDEKWKLSRDDPNGHXXXXXXXXXXXXXXXXXXXXXYKPPLVGNSSQKNSSFRSPL 253
           M+YYMDEKWKLS++DPN +                       PPL  + SQK SS     
Sbjct: 1   MEYYMDEKWKLSKEDPNNNSYNSSSKSSLRRSYSQHCPISSDPPLPRSYSQKTSSSSKS- 59

Query: 254 XXXXXXXXXXXXXXXXXXXXXXXXXXRCADFTRKCSNLAKEQRAKFYIVKRCITMLVRWN 433
                                     R ++F  KCS +AKEQ+AKFYIVKRCI MLVRWN
Sbjct: 60  ------------------RLSKSSSQRSSNFKSKCSTMAKEQKAKFYIVKRCIAMLVRWN 101

Query: 434 KNG--GDS 451
           K+   GDS
Sbjct: 102 KHDKHGDS 109


>ref|XP_002299860.1| predicted protein [Populus trichocarpa] gi|222847118|gb|EEE84665.1|
           predicted protein [Populus trichocarpa]
          Length = 91

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 38/119 (31%), Positives = 55/119 (46%)
 Frame = +2

Query: 86  MDEKWKLSRDDPNGHXXXXXXXXXXXXXXXXXXXXXYKPPLVGNSSQKNSSFRSPLXXXX 265
           MDEKWKLS+ + +                        K PL+  SS K+SS + PL    
Sbjct: 1   MDEKWKLSKKEGSSSFTRSFSTKSSSS----------KAPLLRTSSLKSSSPKCPLPRSF 50

Query: 266 XXXXXXXXXXXXXXXXXXXXXXRCADFTRKCSNLAKEQRAKFYIVKRCITMLVRWNKNG 442
                                 + +  + KCS+LAKEQ+A+FYI++RC+ MLV W+K+G
Sbjct: 51  SQ--------------------KNSSISHKCSSLAKEQKARFYIMRRCVAMLVCWHKHG 89


>ref|XP_002314165.1| predicted protein [Populus trichocarpa] gi|222850573|gb|EEE88120.1|
           predicted protein [Populus trichocarpa]
          Length = 91

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 38/119 (31%), Positives = 55/119 (46%)
 Frame = +2

Query: 86  MDEKWKLSRDDPNGHXXXXXXXXXXXXXXXXXXXXXYKPPLVGNSSQKNSSFRSPLXXXX 265
           M EKWKLS+ + +                        K PL+ +SS K SS + PL    
Sbjct: 1   MAEKWKLSKKEGSSSFTRSFSTKSSSS----------KAPLLRSSSLKISSPKCPLPRSC 50

Query: 266 XXXXXXXXXXXXXXXXXXXXXXRCADFTRKCSNLAKEQRAKFYIVKRCITMLVRWNKNG 442
                                 + +  +RKCS+LAKEQ+A+FYI++RC+ MLV W+K+G
Sbjct: 51  SQ--------------------KSSSISRKCSSLAKEQKARFYIMRRCVAMLVCWHKHG 89


>ref|NP_565910.1| protein rotundifolia like 8 [Arabidopsis thaliana]
           gi|20197045|gb|AAM14893.1| Expressed protein
           [Arabidopsis thaliana] gi|21555300|gb|AAM63828.1|
           unknown [Arabidopsis thaliana]
           gi|26450322|dbj|BAC42277.1| unknown protein [Arabidopsis
           thaliana] gi|28827724|gb|AAO50706.1| unknown protein
           [Arabidopsis thaliana] gi|42822055|tpg|DAA02282.1|
           TPA_exp: DVL11 [Arabidopsis thaliana]
           gi|330254615|gb|AEC09709.1| protein rotundifolia like 8
           [Arabidopsis thaliana]
          Length = 87

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 25/40 (62%), Positives = 31/40 (77%)
 Frame = +2

Query: 332 RCADFTRKCSNLAKEQRAKFYIVKRCITMLVRWNKNGGDS 451
           RCA FTRKC+ L KEQRA+FYI++RC+ ML+ W  N  DS
Sbjct: 49  RCA-FTRKCARLVKEQRARFYIMRRCVIMLICWRDNYSDS 87


>gb|AEX12455.1| hypothetical protein 2_3237_01 [Pinus taeda]
           gi|367066088|gb|AEX12456.1| hypothetical protein
           2_3237_01 [Pinus taeda] gi|367066090|gb|AEX12457.1|
           hypothetical protein 2_3237_01 [Pinus taeda]
           gi|367066092|gb|AEX12458.1| hypothetical protein
           2_3237_01 [Pinus taeda] gi|367066094|gb|AEX12459.1|
           hypothetical protein 2_3237_01 [Pinus taeda]
          Length = 59

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 22/35 (62%), Positives = 31/35 (88%)
 Frame = +2

Query: 338 ADFTRKCSNLAKEQRAKFYIVKRCITMLVRWNKNG 442
           + FTR+CS+L KEQRA+FYI++RC++ML+ WNK G
Sbjct: 23  SSFTRRCSSLVKEQRARFYIMRRCVSMLLCWNKYG 57


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