BLASTX nr result

ID: Cephaelis21_contig00047550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00047550
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278924.2| PREDICTED: putative UPF0481 protein At3g0264...    57   2e-06
emb|CBI31681.3| unnamed protein product [Vitis vinifera]               57   2e-06
emb|CAN62047.1| hypothetical protein VITISV_026044 [Vitis vinifera]    57   2e-06
ref|XP_002313925.1| predicted protein [Populus trichocarpa] gi|2...    56   4e-06
ref|NP_001056969.1| Os06g0179500 [Oryza sativa Japonica Group] g...    55   6e-06

>ref|XP_002278924.2| PREDICTED: putative UPF0481 protein At3g02645-like [Vitis vinifera]
          Length = 551

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
 Frame = -3

Query: 219 SNFPSSDSQKRW----RAHMTDNYIKNHRIRPCVFQVPDNLRDTKPEAYIPQIIGLGPYH 52
           SN  SS  +  W    R  + +    N  +  C+F VP  L  TKP+ Y+PQ + LGPYH
Sbjct: 3   SNSNSSFDELEWVIQIRRTLDEELEDNSEVPVCIFNVPKTLMATKPDCYVPQEVALGPYH 62

Query: 51  HFRPEVQLMSSKKREA 4
            +RPE+  M   K  A
Sbjct: 63  RWRPELYEMERYKLAA 78


>emb|CBI31681.3| unnamed protein product [Vitis vinifera]
          Length = 421

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
 Frame = -3

Query: 219 SNFPSSDSQKRW----RAHMTDNYIKNHRIRPCVFQVPDNLRDTKPEAYIPQIIGLGPYH 52
           SN  SS  +  W    R  + +    N  +  C+F VP  L  TKP+ Y+PQ + LGPYH
Sbjct: 3   SNSNSSFDELEWVIQIRRTLDEELEDNSEVPVCIFNVPKTLMATKPDCYVPQEVALGPYH 62

Query: 51  HFRPEVQLMSSKKREA 4
            +RPE+  M   K  A
Sbjct: 63  RWRPELYEMERYKLAA 78


>emb|CAN62047.1| hypothetical protein VITISV_026044 [Vitis vinifera]
          Length = 551

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
 Frame = -3

Query: 219 SNFPSSDSQKRW----RAHMTDNYIKNHRIRPCVFQVPDNLRDTKPEAYIPQIIGLGPYH 52
           SN  SS  +  W    R  + +    N  +  C+F VP  L  TKP+ Y+PQ + LGPYH
Sbjct: 3   SNSNSSFDELEWVIQIRRTLDEELEDNSEVPVCIFNVPKTLMATKPDCYVPQEVALGPYH 62

Query: 51  HFRPEVQLMSSKKREA 4
            +RPE+  M   K  A
Sbjct: 63  RWRPELYEMERYKLAA 78


>ref|XP_002313925.1| predicted protein [Populus trichocarpa] gi|222850333|gb|EEE87880.1|
           predicted protein [Populus trichocarpa]
          Length = 559

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
 Frame = -3

Query: 237 INMSFASNFPSSDSQKRW----RAHMTDNYIKNHRIRPCVFQVPDNLRDTKPEAYIPQII 70
           +N + +SN   S  + RW    R  + +    +  I  C+F VP  L  + P++Y PQ +
Sbjct: 4   LNSNMSSNSNLSFDEHRWIINIRRTLEEELENDAEIPVCIFNVPKALMTSDPDSYTPQEV 63

Query: 69  GLGPYHHFRPEVQLMSSKKREA 4
            +GPYHH+RPE+  M   K  A
Sbjct: 64  AIGPYHHWRPELYEMERYKLAA 85


>ref|NP_001056969.1| Os06g0179500 [Oryza sativa Japonica Group]
           gi|24413990|dbj|BAC22241.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|113595009|dbj|BAF18883.1| Os06g0179500 [Oryza
           sativa Japonica Group]
          Length = 586

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/43 (58%), Positives = 29/43 (67%)
 Frame = -3

Query: 132 VFQVPDNLRDTKPEAYIPQIIGLGPYHHFRPEVQLMSSKKREA 4
           VF VP  L+  KPEAY+PQ I LGPYHH+RPE+  M   K  A
Sbjct: 48  VFNVPKQLQAHKPEAYVPQFIALGPYHHWRPELYEMERYKLAA 90


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