BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00047329
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523454.1| RNA binding protein, putative [Ricinus commu...    80   1e-13
ref|XP_002533980.1| conserved hypothetical protein [Ricinus comm...    71   8e-11
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    69   4e-10
ref|XP_003621614.1| DNA-directed RNA polymerase III subunit RPC6...    67   2e-09
gb|AAX95313.1| hypothetical protein [Oryza sativa Japonica Group...    66   3e-09

>ref|XP_002523454.1| RNA binding protein, putative [Ricinus communis]
           gi|223537282|gb|EEF38913.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 446

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 48/167 (28%), Positives = 83/167 (49%)
 Frame = +1

Query: 4   KSGYHLAHSTFIMNRSSASSITIRDPI*ASLSKLPLSPRVQIFCWRAYQDILPWKVNMIK 183
           +S Y++A ++ ++N +  S+     P+     +L +   V+ F WR   ++LP   N+  
Sbjct: 101 RSTYYIAWNS-LLNFTPPSTSHGTAPVVNKCWRLNILHGVKHFMWRLNHNLLPCIENLKN 159

Query: 184 RGIATESLCDICNLAAESRIHILKDCQWARSFWISSPLGLRTHAQQSNSILDWFKLI*SF 363
           R I    +C  C    E++ ++ K CQ+ RSFW++ PLGLR        + +W   I S 
Sbjct: 160 RKIDMGEICSRCGGCVETQTYVFKKCQFVRSFWLTYPLGLRVDTIVVEDLKNWVNQIHSV 219

Query: 364 NDEDIVCQFMVLCWKLWYCWNIKKFQSQEPYFFHHQQQALKFLADYR 504
            D+D + +F +L W  W   N   F+ +E       Q+AL FL  ++
Sbjct: 220 GDDDFIEKFAMLLWCYWNLRNKFIFERKEEDVVTTVQRALVFLHGFQ 266


>ref|XP_002533980.1| conserved hypothetical protein [Ricinus communis]
           gi|223526031|gb|EEF28400.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 168

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 34/107 (31%), Positives = 58/107 (54%)
 Frame = +1

Query: 121 VQIFCWRAYQDILPWKVNMIKRGIATESLCDICNLAAESRIHILKDCQWARSFWISSPLG 300
           V+ F WR   + LP   N+ +RGI+ + +C  C    E +++ L D   +RS+W++SPLG
Sbjct: 19  VKQFLWRIDLNSLPCLANLARRGISVDVMCSWCGHEFEDQLYSLNDYPISRSYWLASPLG 78

Query: 301 LRTHAQQSNSILDWFKLI*SFNDEDIVCQFMVLCWKLWYCWNIKKFQ 441
           +++    +  +  W   + S  D+ ++  F VL   LW CW +K  Q
Sbjct: 79  IQSDQVPATDVRMWLDSVASLKDDQLLETFSVL---LWNCWALKNQQ 122


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 5/126 (3%)
 Frame = +1

Query: 88  ASLSKLPLSPRVQIFCWRAYQDILPWKVNMIKRGIATESLCDICNLAAESRIHILKDCQW 267
           A L K+   P++  F WRA ++ LP +  +  R + T   C IC    E+ +H L +C  
Sbjct: 509 AQLWKVTAPPKILNFAWRAARNCLPTRFALTIRHVDTPMCCPICRSELETTLHALVECVA 568

Query: 268 ARSFWISSPLGLRTHAQQSNSILDWFKLI*SFNDEDIVCQFMVLCWKLWY-----CWNIK 432
           AR  W  S  GL        S +DW   + ++ D  +  +++ +CW LW+      WN +
Sbjct: 569 ARDVWDES--GLAMLQGNFGSFVDWLATMFAYCDFVVFAKYLAVCWGLWWRRNDVVWNGR 626

Query: 433 KFQSQE 450
            + SQ+
Sbjct: 627 IWHSQQ 632


>ref|XP_003621614.1| DNA-directed RNA polymerase III subunit RPC6 [Medicago truncatula]
           gi|355496629|gb|AES77832.1| DNA-directed RNA polymerase
           III subunit RPC6 [Medicago truncatula]
          Length = 456

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
 Frame = +1

Query: 100 KLPLSPRVQIFCWRAYQDILPWKVNMIKRGIATESLCDICNLAAESRIHILKDCQWARSF 279
           KLPL  RV+ F W+  ++I+P + N+ +RG+  +++C +C  A ES  H    C      
Sbjct: 265 KLPLPTRVRNFMWKLARNIIPTRCNLRRRGVVLDTVCPLCFDADESSNHRFMACPMTLQV 324

Query: 280 WISSPLGLRTHAQQSNS--ILDWFKLI*SFNDEDIVCQFMVLCWKLWYCWN 426
           W +SPLG +   Q   +  +L W     S  +   V  F V  WK+W+  N
Sbjct: 325 WFASPLGFQPPPQTDLNAWLLSWL----SAKEPLAVQLFCVCLWKIWFFRN 371


>gb|AAX95313.1| hypothetical protein [Oryza sativa Japonica Group]
            gi|77550455|gb|ABA93252.1| retrotransposon protein,
            putative, unclassified, expressed [Oryza sativa Japonica
            Group]
          Length = 1063

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 44/148 (29%), Positives = 64/148 (43%), Gaps = 6/148 (4%)
 Frame = +1

Query: 1    VKSGYHLAHSTFIMNRSSASSITIRDPI*ASLSKLPLSPRVQIFCWRAYQDILPWKVNMI 180
            ++S YHLA S    + SS+SS  I       L K  +  +V+I  W+A  + LP   N  
Sbjct: 695  IRSAYHLATSLAESDSSSSSSGVILSKTWDCLRKCKVLQKVKIHAWKAASNYLPTMENKK 754

Query: 181  KRGIATESLCDICNLAAESRIHILKDCQWARSFWISS------PLGLRTHAQQSNSILDW 342
            KR +    +C IC +  E  IH L  C  AR  WI           +       N +LD 
Sbjct: 755  KRNLEASEVCKICGIEKEDTIHALYRCPQARQLWILMRDVIYLDPAVVGRCTGPNRVLDL 814

Query: 343  FKLI*SFNDEDIVCQFMVLCWKLWYCWN 426
              L+     ED    F++  W++W+  N
Sbjct: 815  LMLL----PEDNRMFFLMTLWRVWFIRN 838