BLASTX nr result

ID: Cephaelis21_contig00046982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00046982
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518080.1| leucine-rich repeat-containing protein, puta...    59   3e-07
ref|XP_002328584.1| nbs-lrr resistance protein [Populus trichoca...    58   7e-07

>ref|XP_002518080.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
           gi|223542676|gb|EEF44213.1| leucine-rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 940

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/78 (35%), Positives = 48/78 (61%)
 Frame = -3

Query: 264 SSQLATLGKLLDDAEKRRLTEVHVRMWLENIKGIIYELEDWLDEWNINVHKPKDLDEVVG 85
           ++ L  +  +L+DAEK+++ E  V++WLE +K I Y+L+D LDEWN  +++PK     + 
Sbjct: 39  TTALTAIRAVLNDAEKKQVKESSVQVWLEGLKAISYDLDDLLDEWNTKIYRPK-----IE 93

Query: 84  NLRRRTPSHLKKVRSFIP 31
            +R+      KK+  F P
Sbjct: 94  RIRKDKSLFSKKMVCFSP 111


>ref|XP_002328584.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222838566|gb|EEE76931.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 906

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/77 (35%), Positives = 48/77 (62%)
 Frame = -3

Query: 264 SSQLATLGKLLDDAEKRRLTEVHVRMWLENIKGIIYELEDWLDEWNINVHKPKDLDEVVG 85
           ++ L  +  +L DAEK+++ E  VR+WLE ++ I Y+L+D LDEWN  + +PK + E++G
Sbjct: 35  TTTLTAIRSVLIDAEKKQVKEKRVRVWLEQLEAISYDLDDLLDEWNTKICEPKRI-EIMG 93

Query: 84  NLRRRTPSHLKKVRSFI 34
           +        + ++  FI
Sbjct: 94  HHHSSLSKKMVRLSKFI 110


Top