BLASTX nr result

ID: Cephaelis21_contig00046980 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00046980
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat...   127   7e-28
emb|CBI34855.3| unnamed protein product [Vitis vinifera]              127   7e-28
ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago ...   110   2e-22
ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat...   104   7e-21
ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat...   100   9e-20

>ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950 [Vitis vinifera]
          Length = 1291

 Score =  127 bits (320), Expect = 7e-28
 Identities = 63/122 (51%), Positives = 82/122 (67%), Gaps = 2/122 (1%)
 Frame = +3

Query: 93  MGTWHLLVDLFQSCRDGKSLSQLHSISIKTGLIHDVLLAAKLNHLYRIYAPISAFRKLFD 272
           M +  +LVDLFQ+C +G+S+SQLHS   KTG++HD   A KLN LY   A + A RK+FD
Sbjct: 1   MRSRQVLVDLFQACNNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFD 60

Query: 273 ETPQRTTSTWNSILKCYCGERRYREALSLFSRML--SSEKPDHFTVAIVLKACCGLRDIE 446
           ETP      WNS L+ YC E+++ E L LF  M+  + E PD+FT+ I LKAC GLR +E
Sbjct: 61  ETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLE 120

Query: 447 LG 452
           LG
Sbjct: 121 LG 122



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
 Frame = +3

Query: 150  LSQLHSISIKTGLIHDVLLAAKLNHLYRIYAPISAFRKLFDETPQRTTSTWNSILKCYCG 329
            L + H+     GL +D  +  K   +Y  +  I A   +F++ P   +  WN +++ +  
Sbjct: 736  LKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFAT 795

Query: 330  ERRYREALSLFSRMLSSE-KPDHFTVAIVLKACCGLRDIELG 452
            + R+  +L L+S+M+    KPD F     LK+C GL D++ G
Sbjct: 796  DGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRG 837


>emb|CBI34855.3| unnamed protein product [Vitis vinifera]
          Length = 956

 Score =  127 bits (320), Expect = 7e-28
 Identities = 63/122 (51%), Positives = 82/122 (67%), Gaps = 2/122 (1%)
 Frame = +3

Query: 93  MGTWHLLVDLFQSCRDGKSLSQLHSISIKTGLIHDVLLAAKLNHLYRIYAPISAFRKLFD 272
           M +  +LVDLFQ+C +G+S+SQLHS   KTG++HD   A KLN LY   A + A RK+FD
Sbjct: 1   MRSRQVLVDLFQACNNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFD 60

Query: 273 ETPQRTTSTWNSILKCYCGERRYREALSLFSRML--SSEKPDHFTVAIVLKACCGLRDIE 446
           ETP      WNS L+ YC E+++ E L LF  M+  + E PD+FT+ I LKAC GLR +E
Sbjct: 61  ETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLE 120

Query: 447 LG 452
           LG
Sbjct: 121 LG 122


>ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
           gi|355505728|gb|AES86870.1| hypothetical protein
           MTR_4g015760 [Medicago truncatula]
          Length = 838

 Score =  110 bits (274), Expect = 2e-22
 Identities = 57/122 (46%), Positives = 77/122 (63%), Gaps = 6/122 (4%)
 Frame = +3

Query: 105 HLLVDLFQSCRDGKSLSQLHSISIKTGLIHDVLLAAKLNHLYRIYAPISAFRKLFDETPQ 284
           +LLV L ++C    S+SQLHS  +K GL+HD  +  KLN LY  YA I    KLF ETP 
Sbjct: 140 NLLVKLLETCCSKLSISQLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPH 199

Query: 285 RTTSTWNSILKCYCGERRYREALSLFSRMLS------SEKPDHFTVAIVLKACCGLRDIE 446
           RT   WN++L+ YC E  + E LSLF +M +       E+PD+++V+I LK+C GLR + 
Sbjct: 200 RTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLL 259

Query: 447 LG 452
           LG
Sbjct: 260 LG 261


>ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Glycine max]
          Length = 700

 Score =  104 bits (260), Expect = 7e-21
 Identities = 54/119 (45%), Positives = 77/119 (64%), Gaps = 4/119 (3%)
 Frame = +3

Query: 108 LLVDLFQSCRDGKSLSQLHSISIKTGLIHDVLLAAKLNHLYRIYAPISAFRKLFDETPQR 287
           LLV L ++C    S+ QLHS  +K GL HD  +  KLN LY  YA +    KLF+ETP +
Sbjct: 6   LLVKLLETCCSKISIPQLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCK 65

Query: 288 TTSTWNSILKCYCGERRYREALSLFSRM----LSSEKPDHFTVAIVLKACCGLRDIELG 452
           T   WN++L+ Y  E ++ E LSLF +M    ++ E+PD++TV+I LK+C GL+ +ELG
Sbjct: 66  TVYLWNALLRSYFLEGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELG 124


>ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Glycine max]
          Length = 701

 Score =  100 bits (250), Expect = 9e-20
 Identities = 53/119 (44%), Positives = 77/119 (64%), Gaps = 4/119 (3%)
 Frame = +3

Query: 108 LLVDLFQSCRDGKSLSQLHSISIKTGLIHDVLLAAKLNHLYRIYAPISAFRKLFDETPQR 287
           LLV L ++C    S++QLHS  +K GL  D  +  KLN LY  YA +    KLF+ETP +
Sbjct: 6   LLVKLLETCCSKISITQLHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEETPCK 65

Query: 288 TTSTWNSILKCYCGERRYREALSLFSRM----LSSEKPDHFTVAIVLKACCGLRDIELG 452
           T   WN++L+ Y  E ++ E LSLF +M    ++ E+PD++TV+I LK+C GL+ +ELG
Sbjct: 66  TVYLWNALLRSYFLEGKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELG 124


Top