BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00046917
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318989.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17
ref|XP_003603103.1| DNA-directed RNA polymerase I subunit RPA12 ...    89   3e-16
ref|XP_003634465.1| PREDICTED: uncharacterized protein LOC100853...    87   1e-15
emb|CBI19898.3| unnamed protein product [Vitis vinifera]               87   1e-15
ref|NP_566786.1| TFIIB zinc-binding protein [Arabidopsis thalian...    84   9e-15

>ref|XP_002318989.1| predicted protein [Populus trichocarpa] gi|222857365|gb|EEE94912.1|
           predicted protein [Populus trichocarpa]
          Length = 117

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 42/92 (45%), Positives = 62/92 (67%)
 Frame = -2

Query: 276 RQRDFMFCEMCGTMLPFKSPKKVVCPVCNHQKRIKDIAKREIRYTLSAEDIRRELGVSML 97
           R  DFMFC++CGTM+   S + V CP+C  +K  KD+++REI Y +S+ED+RR+LG+S  
Sbjct: 5   RGGDFMFCDLCGTMMFLYSKEHVECPLCKFKKSAKDLSEREISYQVSSEDMRRDLGISHF 64

Query: 96  DVSEEEKELKQMDYNAKCKACGHLGMSYVARQ 1
              E + E+K M+ N KC+ CGH  + +  RQ
Sbjct: 65  ---EGKMEVKDMEINKKCEKCGHTKLKFSTRQ 93


>ref|XP_003603103.1| DNA-directed RNA polymerase I subunit RPA12 [Medicago truncatula]
           gi|357470681|ref|XP_003605625.1| DNA-directed RNA
           polymerase I subunit RPA12 [Medicago truncatula]
           gi|355492151|gb|AES73354.1| DNA-directed RNA polymerase
           I subunit RPA12 [Medicago truncatula]
           gi|355506680|gb|AES87822.1| DNA-directed RNA polymerase
           I subunit RPA12 [Medicago truncatula]
          Length = 115

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 43/95 (45%), Positives = 60/95 (63%)
 Frame = -2

Query: 285 MGCRQRDFMFCEMCGTMLPFKSPKKVVCPVCNHQKRIKDIAKREIRYTLSAEDIRRELGV 106
           M  R RDF+FC +CGTML   S    +CP+C  +  IKDI  +EI YT+SAEDIRRELG+
Sbjct: 1   MYSRGRDFLFCHLCGTMLTVPSTDYALCPLCKTKCNIKDIKGKEISYTISAEDIRRELGI 60

Query: 105 SMLDVSEEEKELKQMDYNAKCKACGHLGMSYVARQ 1
            ++    EE++++    N  C+ CGH   ++  RQ
Sbjct: 61  DLI----EEQKVQLSKVNKTCEKCGHGEAAFYTRQ 91


>ref|XP_003634465.1| PREDICTED: uncharacterized protein LOC100853901 [Vitis vinifera]
          Length = 104

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/85 (49%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
 Frame = -2

Query: 276 RQRDFMFCEMCGTMLPFKSPKKVVCPVCNHQKRIKDIAKREIRYTLSAEDIRRELG---- 109
           RQRDFMFC +CGTML   S K   CP+C  ++++KDI+ REIRYT+SAEDIRREL     
Sbjct: 5   RQRDFMFCNLCGTMLCMSSTKYAECPLCKSRRKVKDISGREIRYTVSAEDIRRELNIEPF 64

Query: 108 VSMLDVSEEEKELKQMDYNAKCKAC 34
           V +  +  EE E +      +C  C
Sbjct: 65  VKLDGIITEESEAQNAKTKGRCDRC 89


>emb|CBI19898.3| unnamed protein product [Vitis vinifera]
          Length = 126

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/85 (49%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
 Frame = -2

Query: 276 RQRDFMFCEMCGTMLPFKSPKKVVCPVCNHQKRIKDIAKREIRYTLSAEDIRRELG---- 109
           RQRDFMFC +CGTML   S K   CP+C  ++++KDI+ REIRYT+SAEDIRREL     
Sbjct: 5   RQRDFMFCNLCGTMLCMSSTKYAECPLCKSRRKVKDISGREIRYTVSAEDIRRELNIEPF 64

Query: 108 VSMLDVSEEEKELKQMDYNAKCKAC 34
           V +  +  EE E +      +C  C
Sbjct: 65  VKLDGIITEESEAQNAKTKGRCDRC 89


>ref|NP_566786.1| TFIIB zinc-binding protein [Arabidopsis thaliana]
           gi|9279599|dbj|BAB01057.1| unnamed protein product
           [Arabidopsis thaliana] gi|21536551|gb|AAM60883.1|
           putative RNA polymerase I subunit [Arabidopsis thaliana]
           gi|88011125|gb|ABD38906.1| At3g25940 [Arabidopsis
           thaliana] gi|332643572|gb|AEE77093.1| TFIIB zinc-binding
           protein [Arabidopsis thaliana]
          Length = 119

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 42/93 (45%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
 Frame = -2

Query: 276 RQRDFMFCEMCGTMLPFKSPKKVVCPVCNHQKRIKDIAKREIRYTLSAEDIRRELGVSML 97
           R+ +F+FC +CGTML  KS K   CP C   +  KDI  +EI YT+SAEDIRRELG+S+ 
Sbjct: 5   RESEFLFCNLCGTMLVLKSTKYAECPHCKTTRNAKDIIDKEIAYTVSAEDIRRELGISLF 64

Query: 96  -DVSEEEKELKQMDYNAKCKACGHLGMSYVARQ 1
            + ++ E EL ++     C+ C H  + Y  RQ
Sbjct: 65  GEKTQAEAELPKI--KKACEKCQHPELVYTTRQ 95