BLASTX nr result

ID: Cephaelis21_contig00046753 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00046753
         (685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE65289.1| hypothetical protein OsJ_20518 [Oryza sativa Japo...   101   2e-19
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   100   5e-19
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...    92   9e-17
gb|EEC76821.1| hypothetical protein OsI_14959 [Oryza sativa Indi...    91   2e-16
gb|AAD37019.2| putative non-LTR retrolelement reverse transcript...    85   2e-15

>gb|EEE65289.1| hypothetical protein OsJ_20518 [Oryza sativa Japonica Group]
          Length = 826

 Score =  101 bits (251), Expect = 2e-19
 Identities = 63/206 (30%), Positives = 99/206 (48%), Gaps = 1/206 (0%)
 Frame = -1

Query: 685 GFSGHSFTWCNNRSGKARIWKRLDRILADPQWMSLGLSSAVTHLARVGSDYTPLLV*HCL 506
           G++G ++TW N R+G   I++RLDR LA+ +W S    + V HL  +  D+ P+L+    
Sbjct: 2   GYNGPAYTWTNKRTGNNVIYERLDRCLANVEWCSKFPYTTVYHLPLIYGDHAPILILLNP 61

Query: 505 PH-TPKSSFRFLNFWTSEASFLDEVKKIWNIQISGSSFMILYRXXXXXXXXXXKWSWENY 329
            H  PK SF+F N+W SE  F D  K  WN  ++GS                  W     
Sbjct: 62  THRKPKKSFKFENWWLSENDFHDLAKNSWNSIVNGS----FVAKAKNLGQNLLTWC-RKK 116

Query: 328 GNIFSEVFLAEEEIKAVEPALELDPTPQNLEKMKVAKVRHSQYLNNTVQFWRQKASLHWL 149
             +  ++   E+EI  ++ +   +      EK K    +H   L+    + +Q+A  HW+
Sbjct: 117 KPLQDQIASTEQEILDIQSS---NNRQDQQEKEKELITKHDSLLHKLSDYHKQRAKKHWV 173

Query: 148 KEGDCNSKLFHQSVKVKRAALRIHRI 71
           K+GD N+  FHQ+   +R   RI  I
Sbjct: 174 KDGDRNTSFFHQAAIKRRRKNRISSI 199


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 99.8 bits (247), Expect = 5e-19
 Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 12/218 (5%)
 Frame = -1

Query: 685 GFSGHSFTWCNNRSGKARIWKRLDRILADPQWMSLGLSSAVTHLARVGSDYTPLL----- 521
           GF G+ FTW NNR G A I +RLDR +A+  W      S V+HL +  SD+ P++     
Sbjct: 179 GFVGYEFTWTNNRGGDANIQERLDRFVANDLWKIKFPGSFVSHLPKRKSDHVPIVASVKG 238

Query: 520 V*HCLPHTPKSS-FRFLNFWTSEASFLDEVKKIW------NIQISGSSFMILYRXXXXXX 362
                  T KS  FRF   W  E    + VK+ W       I ++ ++  +L        
Sbjct: 239 AQSAATRTKKSKRFRFEAMWLREGESDEVVKETWMRGTDAGINLARTANKLL-------- 290

Query: 361 XXXXKWSWENYGNIFSEVFLAEEEIKAVEPALELDPTPQNLEKMKVAKVRHSQYLNNTVQ 182
                WS + +G++  E+ + + ++K +   +E +P+  N+  M+    R  +       
Sbjct: 291 ----SWSKQKFGHVAKEIRMCQHQMKVL---MESEPSEDNIMHMRALDARMDELEKREEV 343

Query: 181 FWRQKASLHWLKEGDCNSKLFHQSVKVKRAALRIHRIK 68
           +W Q++   W+K GD N+K FHQ    +     + RI+
Sbjct: 344 YWHQRSRQDWIKSGDKNTKFFHQKASHREQRNNVRRIR 381


>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score = 92.0 bits (227), Expect = 9e-17
 Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 5/210 (2%)
 Frame = -1

Query: 682  FSGHSFTWCNNRSGKARIWKRLDRILADPQWMSLGLSSAVTHLARVGSDYTPLLV*HCLP 503
            F G  F+W   R G+  I +RLDR L +  W S   ++ + HL ++GSD+ PLL    L 
Sbjct: 780  FKGPGFSWFAMRHGRVFIKERLDRALGNIAWSSSQPNTQILHLPKIGSDHRPLL----LD 835

Query: 502  HTPK-----SSFRFLNFWTSEASFLDEVKKIWNIQISGSSFMILYRXXXXXXXXXXKWSW 338
              PK       FRF   WT+   + D +++ W     GS+     R           WS 
Sbjct: 836  SNPKMLNKTRLFRFEQMWTTHEEYSDVIQRSWPPAFGGSAMRSWNRNLLSCGKALKMWSK 895

Query: 337  ENYGNIFSEVFLAEEEIKAVEPALELDPTPQNLEKMKVAKVRHSQYLNNTVQFWRQKASL 158
            E + N   +V    + +  +E   + +P P    ++ +   + ++       +W Q++ +
Sbjct: 896  EKFSNPSVQV---ADLLSDIEKLHQSNP-PDAHHQINILTDQVTKLWTQDEMYWHQRSRV 951

Query: 157  HWLKEGDCNSKLFHQSVKVKRAALRIHRIK 68
            +WLK GD NS  FHQ+   +R   +I R+K
Sbjct: 952  NWLKLGDQNSSFFHQTTIQRRQYNKIVRLK 981


>gb|EEC76821.1| hypothetical protein OsI_14959 [Oryza sativa Indica Group]
          Length = 405

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 1/203 (0%)
 Frame = -1

Query: 685 GFSGHSFTWCNNRSGKARIWKRLDRILADPQWMSLGLSSAVTHLARVGSDYTPLL-V*HC 509
           G++G ++TW N ++G   + +RLDR LA+ +W  L   + V HL  + SD+ P++ + + 
Sbjct: 40  GYNGPAYTWSNKKNGCDLVLERLDRCLANVEWCMLFPHTTVYHLPMLYSDHAPIIAILNP 99

Query: 508 LPHTPKSSFRFLNFWTSEASFLDEVKKIWNIQISGSSFMILYRXXXXXXXXXXKWSWENY 329
           + H PK SF+F N+W SE  F  E +  W+   S       +            W+ +  
Sbjct: 100 IHHHPKKSFKFENWWISEKDFQKEAQAGWSAINSN-----FHSKAIHLGKHLSTWN-KKK 153

Query: 328 GNIFSEVFLAEEEIKAVEPALELDPTPQNLEKMKVAKVRHSQYLNNTVQFWRQKASLHWL 149
           G++ S++   E +I  V+           L + K  +  H   ++    F++Q+A  +W+
Sbjct: 154 GSLHSQLKQVENQILQVQSNAN---RANLLHEEKRLEQLHDALMSKLSDFYKQRAKKYWI 210

Query: 148 KEGDCNSKLFHQSVKVKRAALRI 80
           ++GD N+  F Q+V  +R   RI
Sbjct: 211 QQGDRNTSFFQQAVHKRRRKNRI 233


>gb|AAD37019.2| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 855

 Score = 85.1 bits (209), Expect(2) = 2e-15
 Identities = 61/209 (29%), Positives = 92/209 (44%), Gaps = 3/209 (1%)
 Frame = -1

Query: 685  GFSGHSFTWCNNRSGKARIWKRLDRILADPQWMSLGLSSAVTHLARVGSDYTPLLV*--- 515
            GF G+ FTW   R     + KRLDR+L  PQ       ++VTHL    SD+ P+ +    
Sbjct: 587  GFKGNKFTWKRGRVESTFVAKRLDRVLCRPQTRLKWQEASVTHLPFFASDHAPIYIQLEP 646

Query: 514  HCLPHTPKSSFRFLNFWTSEASFLDEVKKIWNIQISGSSFMILYRXXXXXXXXXXKWSWE 335
                +  +  FRF   W + + F D ++  WN +  G + + L            KW+ E
Sbjct: 647  EVRSNPLRRPFRFEAAWLTHSGFKDLLQASWNTE--GETPVAL----AALKSKLKKWNRE 700

Query: 334  NYGNIFSEVFLAEEEIKAVEPALELDPTPQNLEKMKVAKVRHSQYLNNTVQFWRQKASLH 155
             +G++         EIK V+  LE++ T   L K +         L      W QK+   
Sbjct: 701  VFGDVNRRKESLMNEIKVVQELLEINQTDNLLSKEEELIKEFDVVLEQEEVLWFQKSREK 760

Query: 154  WLKEGDCNSKLFHQSVKVKRAALRIHRIK 68
            W++ GD N+K FH    V+R   RI  +K
Sbjct: 761  WVELGDRNTKYFHTMTVVRRRRNRIEMLK 789



 Score = 23.1 bits (48), Expect(2) = 2e-15
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 51  WVDTLEEIAKTAVDYF 4
           WV   +E+ K AVDY+
Sbjct: 795 WVSQQQELEKMAVDYY 810


Top