BLASTX nr result

ID: Cephaelis21_contig00046749 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00046749
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE69154.1| hypothetical protein OsJ_28290 [Oryza sativa Japo...    97   1e-18
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta...    94   1e-17
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta...    94   1e-17
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...    91   7e-17
emb|CAB75484.1| putative protein [Arabidopsis thaliana]                91   7e-17

>gb|EEE69154.1| hypothetical protein OsJ_28290 [Oryza sativa Japonica Group]
          Length = 615

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 40/100 (40%), Positives = 62/100 (62%)
 Frame = -3

Query: 318 DKKDICKELNGLKEQDKAKYLGLPLEIGRSKKEVFQFISNTAAKRVTNWRNRFLSMAGRE 139
           +K+++   L    E    KYLGLP+ +GRS+ + F ++ +   KR+  W+ R LS AG+E
Sbjct: 187 EKENVMAGLGIQSEARNEKYLGLPIYMGRSRSQTFSYLKDRVWKRLQGWKERLLSKAGKE 246

Query: 138 VLIKSVISALPVYAMPCYKVPANICNEMNQTAARFWWGLQ 19
           +LIKSV+ ++P YAM C+ +   +CNE+     RFWW  Q
Sbjct: 247 ILIKSVVQSIPTYAMSCFDLTKTLCNELGSLVCRFWWAQQ 286


>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1524

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 40/79 (50%), Positives = 55/79 (69%)
 Frame = -3

Query: 264  KYLGLPLEIGRSKKEVFQFISNTAAKRVTNWRNRFLSMAGREVLIKSVISALPVYAMPCY 85
            KYLGLP + GR KKE+F++I +   KR + W  RFLS AG+E+++KSV  A+PVYAM C+
Sbjct: 905  KYLGLPEQFGRKKKEMFEYIIDRVKKRTSTWSARFLSPAGKEIMLKSVALAMPVYAMSCF 964

Query: 84   KVPANICNEMNQTAARFWW 28
            K+P  I +E+      FWW
Sbjct: 965  KLPKGIVSEIESLLMNFWW 983


>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1750

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 40/79 (50%), Positives = 55/79 (69%)
 Frame = -3

Query: 264  KYLGLPLEIGRSKKEVFQFISNTAAKRVTNWRNRFLSMAGREVLIKSVISALPVYAMPCY 85
            KYLGLP + GR KKE+F++I +   KR + W  RFLS AG+E+++KSV  A+PVYAM C+
Sbjct: 1131 KYLGLPEQFGRKKKEMFEYIIDRVKKRTSTWSARFLSPAGKEIMLKSVALAMPVYAMSCF 1190

Query: 84   KVPANICNEMNQTAARFWW 28
            K+P  I +E+      FWW
Sbjct: 1191 KLPKGIVSEIESLLMNFWW 1209


>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1715

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 38/80 (47%), Positives = 54/80 (67%)
 Frame = -3

Query: 264  KYLGLPLEIGRSKKEVFQFISNTAAKRVTNWRNRFLSMAGREVLIKSVISALPVYAMPCY 85
            KYLGLP ++GR K E+F++I     +R   W   +LS AG+E++IK++  ALPVY+M C+
Sbjct: 1111 KYLGLPEQLGRRKVELFEYIVTKVKERTEGWAYNYLSPAGKEIVIKAIAMALPVYSMNCF 1170

Query: 84   KVPANICNEMNQTAARFWWG 25
             +P  ICNE+N     FWWG
Sbjct: 1171 LLPTLICNEINSLITAFWWG 1190


>emb|CAB75484.1| putative protein [Arabidopsis thaliana]
          Length = 851

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 39/79 (49%), Positives = 54/79 (68%)
 Frame = -3

Query: 264 KYLGLPLEIGRSKKEVFQFISNTAAKRVTNWRNRFLSMAGREVLIKSVISALPVYAMPCY 85
           KYLGLP + GR KKE+F +I +   +R  +W  +FLS AG+E+L+KSV  A+PVYAM C+
Sbjct: 370 KYLGLPEQFGRKKKEMFNYIIDRVKERTASWSAKFLSPAGKEILLKSVALAMPVYAMSCF 429

Query: 84  KVPANICNEMNQTAARFWW 28
           K+P  I +E+      FWW
Sbjct: 430 KLPQGIVSEIESLLMNFWW 448


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