BLASTX nr result

ID: Cephaelis21_contig00046695 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00046695
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280957.1| PREDICTED: glycyl-tRNA synthetase 1, mitocho...    73   3e-11
emb|CBI15763.3| unnamed protein product [Vitis vinifera]               73   3e-11
ref|NP_564337.1| glycyl-tRNA synthetase 1 [Arabidopsis thaliana]...    70   1e-10
gb|AAK92832.1| putative glycyl tRNA synthetase [Arabidopsis thal...    70   2e-10
ref|XP_002893587.1| glycyl-tRNA synthetase [Arabidopsis lyrata s...    69   5e-10

>ref|XP_002280957.1| PREDICTED: glycyl-tRNA synthetase 1, mitochondrial-like [Vitis
           vinifera]
          Length = 710

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 43/80 (53%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
 Frame = +2

Query: 137 MEDSLRKELAHKLDIIQAQGNIVRQLKTSGAPKPDIDAAVQSLNAVKLEK--XXXXXXXX 310
           MEDSLRK L+ K   + AQG  VR+LK SGAPK  IDAAVQ LNA+KLEK          
Sbjct: 24  MEDSLRKALSEKQAAVDAQGGAVRELKASGAPKDAIDAAVQELNALKLEKASIEKQLQAA 83

Query: 311 XXXXXXGLANRDAFRQAVVN 370
                    +RDAFRQA+VN
Sbjct: 84  LTNGNDNALSRDAFRQALVN 103


>emb|CBI15763.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 43/80 (53%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
 Frame = +2

Query: 137 MEDSLRKELAHKLDIIQAQGNIVRQLKTSGAPKPDIDAAVQSLNAVKLEK--XXXXXXXX 310
           MEDSLRK L+ K   + AQG  VR+LK SGAPK  IDAAVQ LNA+KLEK          
Sbjct: 1   MEDSLRKALSEKQAAVDAQGGAVRELKASGAPKDAIDAAVQELNALKLEKASIEKQLQAA 60

Query: 311 XXXXXXGLANRDAFRQAVVN 370
                    +RDAFRQA+VN
Sbjct: 61  LTNGNDNALSRDAFRQALVN 80


>ref|NP_564337.1| glycyl-tRNA synthetase 1 [Arabidopsis thaliana]
           gi|3334349|sp|O23627.1|SYGM1_ARATH RecName:
           Full=Glycine--tRNA ligase 1, mitochondrial; AltName:
           Full=Diadenosine tetraphosphate synthetase; Short=AP-4-A
           synthetase; AltName: Full=Glycyl-tRNA synthetase 1;
           Short=GlyRS 1; Flags: Precursor
           gi|9972358|gb|AAG10608.1|AC008030_8 glycyl-tRNA
           synthetase [Arabidopsis thaliana]
           gi|2564215|emb|CAA05162.1| glycyl-tRNA synthetase
           [Arabidopsis thaliana] gi|332193024|gb|AEE31145.1|
           glycyl-tRNA synthetase 1 [Arabidopsis thaliana]
          Length = 729

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 45/122 (36%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
 Frame = +2

Query: 32  MRVLQIFISSLFRLLINSARPSTSRHLFHTLHLGPM-------EDSLRKELAHKLDIIQA 190
           MR+   F+    + + N  +  T+  L + + + P+       E SLR+ L+ K   ++A
Sbjct: 1   MRIFSTFVFHRRQQIFNLRQFQTTTILRNPISIAPIQIPMDATEQSLRQSLSEKSSSVEA 60

Query: 191 QGNIVRQLKTSGAPKPDIDAAVQSLNAVKLEK--XXXXXXXXXXXXXXGLANRDAFRQAV 364
           QGN VR LK S A KP+IDAA++ LN +KLEK                G  NR+AFR+AV
Sbjct: 61  QGNAVRALKASRAAKPEIDAAIEQLNKLKLEKSTVEKELQSIISSSGNGSLNREAFRKAV 120

Query: 365 VN 370
           VN
Sbjct: 121 VN 122


>gb|AAK92832.1| putative glycyl tRNA synthetase [Arabidopsis thaliana]
          Length = 729

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 45/122 (36%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
 Frame = +2

Query: 32  MRVLQIFISSLFRLLINSARPSTSRHLFHTLHLGPM-------EDSLRKELAHKLDIIQA 190
           MR+   F+    + + N  +  T+  L + + + P+       E SLR+ L+ K   ++A
Sbjct: 1   MRIFSTFVFHRRQQIFNLRQFQTTTILRNPISIAPIQIPMDATEQSLRQSLSEKSSSVEA 60

Query: 191 QGNIVRQLKTSGAPKPDIDAAVQSLNAVKLEK--XXXXXXXXXXXXXXGLANRDAFRQAV 364
           QGN VR LK S A KP+IDAA++ LN +KLEK                G  NR+AFR+AV
Sbjct: 61  QGNAVRALKASRAAKPEIDAAMEQLNKLKLEKSTVEKELQSIISSSGNGSLNREAFRKAV 120

Query: 365 VN 370
           VN
Sbjct: 121 VN 122


>ref|XP_002893587.1| glycyl-tRNA synthetase [Arabidopsis lyrata subsp. lyrata]
           gi|297339429|gb|EFH69846.1| glycyl-tRNA synthetase
           [Arabidopsis lyrata subsp. lyrata]
          Length = 730

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 46/123 (37%), Positives = 68/123 (55%), Gaps = 13/123 (10%)
 Frame = +2

Query: 41  LQIFISSLF-----RLLINSARPSTSRHLFHTLHLGPM------EDSLRKELAHKLDIIQ 187
           ++IF +S+F     + + N  +  T+  L + + + P+      E SLR+ L+ K   ++
Sbjct: 1   MRIFSTSVFPRRQQQQIFNLRQFQTTTILRNPISIAPIQIPMDAEQSLRQSLSEKSSSVE 60

Query: 188 AQGNIVRQLKTSGAPKPDIDAAVQSLNAVKLEK--XXXXXXXXXXXXXXGLANRDAFRQA 361
           AQGN VR LK S A KP+IDAA++ LN +KLEK                G  NR+AFR+A
Sbjct: 61  AQGNAVRALKASRAAKPEIDAAIEQLNRLKLEKSAVEKELQSIISSSGNGSLNREAFRKA 120

Query: 362 VVN 370
           VVN
Sbjct: 121 VVN 123


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