BLASTX nr result

ID: Cephaelis21_contig00046670 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00046670
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]    82   5e-21
emb|CAN64046.1| hypothetical protein VITISV_040537 [Vitis vinifera]    81   6e-21
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...    87   8e-21
dbj|BAG89120.1| unnamed protein product [Oryza sativa Japonica G...    81   4e-20
gb|AAP53789.1| retrotransposon protein, putative, unclassified [...    81   6e-20

>emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]
          Length = 1593

 Score = 82.4 bits (202), Expect(2) = 5e-21
 Identities = 40/60 (66%), Positives = 46/60 (76%)
 Frame = -3

Query: 180  QYADMKRTERELEVGDHVYLKLQPYRQQSTAVRACYKLSSRYYGPYEVLEKIGQVAYKLR 1
            Q AD KR E   EVGD VYL+LQPYRQQS   R  +KLS+RYYGPYE+ E+IG VAYKL+
Sbjct: 1180 QAADKKRREVNFEVGDWVYLRLQPYRQQSVFRRTSHKLSNRYYGPYEIEERIGPVAYKLK 1239



 Score = 43.5 bits (101), Expect(2) = 5e-21
 Identities = 24/59 (40%), Positives = 31/59 (52%)
 Frame = -1

Query: 359  FHSSIAMTPFEALYGVKPLPIPLGP*LDSVIPAATDMMQQHAIVMQQLRDHLSKAQNRI 183
            +HSS  MTPF+ALYG  P  IP        I    D M     ++Q+L+ HL  A NR+
Sbjct: 1120 YHSSTGMTPFQALYGRPPPAIPSYEIGSCPIEELDDQMTARNELLQELKAHLHAANNRM 1178


>emb|CAN64046.1| hypothetical protein VITISV_040537 [Vitis vinifera]
          Length = 1259

 Score = 81.3 bits (199), Expect(2) = 6e-21
 Identities = 39/60 (65%), Positives = 46/60 (76%)
 Frame = -3

Query: 180  QYADMKRTERELEVGDHVYLKLQPYRQQSTAVRACYKLSSRYYGPYEVLEKIGQVAYKLR 1
            Q AD KR E   EVGD VYL+LQPYRQQS   R  +KLS+RYYGPY++ E+IG VAYKL+
Sbjct: 1151 QAADKKRREVNFEVGDWVYLRLQPYRQQSVFRRTSHKLSNRYYGPYQIEERIGPVAYKLK 1210



 Score = 44.3 bits (103), Expect(2) = 6e-21
 Identities = 24/59 (40%), Positives = 31/59 (52%)
 Frame = -1

Query: 359  FHSSIAMTPFEALYGVKPLPIPLGP*LDSVIPAATDMMQQHAIVMQQLRDHLSKAQNRI 183
            +HSS  MTPF+ALYG  P  IP        I    D M     ++Q+L+ HL  A NR+
Sbjct: 1091 YHSSTGMTPFQALYGXPPPAIPSYEIGSCPIEELDDQMTARDELLQELKAHLHAANNRM 1149


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
            thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
            polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score = 87.0 bits (214), Expect(2) = 8e-21
 Identities = 37/59 (62%), Positives = 50/59 (84%)
 Frame = -3

Query: 180  QYADMKRTERELEVGDHVYLKLQPYRQQSTAVRACYKLSSRYYGPYEVLEKIGQVAYKL 4
            Q+AD  RTERE E+GD+VY+KLQPYRQQS  +RA  KLS +Y+GPY+++++ G+VAYKL
Sbjct: 1351 QFADQHRTEREFEIGDYVYVKLQPYRQQSVVMRANQKLSPKYFGPYKIIDRCGEVAYKL 1409



 Score = 38.1 bits (87), Expect(2) = 8e-21
 Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
 Frame = -1

Query: 359  FHSSIAMTPFEALYG-VKPLPIPLGP*LDSVIPAATDMMQQHAIVMQQLRDHLSKAQNRI 183
            +HSS  MTPFE +YG V P+ +P  P  +S +      +Q+   ++  L+ HL +AQ+R+
Sbjct: 1291 YHSSSRMTPFEIVYGQVPPVHLPYLP-GESKVAVVARSLQEREDMLLFLKFHLMRAQHRM 1349


>dbj|BAG89120.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 279

 Score = 80.9 bits (198), Expect(2) = 4e-20
 Identities = 38/57 (66%), Positives = 46/57 (80%)
 Frame = -3

Query: 174 ADMKRTERELEVGDHVYLKLQPYRQQSTAVRACYKLSSRYYGPYEVLEKIGQVAYKL 4
           AD KR+ RE +VGD VYLKLQPY Q S AVRA +KL+ RYYGPY++L ++G VAYKL
Sbjct: 111 ADKKRSFREFQVGDWVYLKLQPYVQSSVAVRANHKLAFRYYGPYQILHRVGAVAYKL 167



 Score = 42.0 bits (97), Expect(2) = 4e-20
 Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
 Frame = -1

Query: 359 FHSSIAMTPFEALYGVKP--LPIPLGP*LDSVIPAATDMMQQHAIVMQQLRDHLSKAQNR 186
           +HS++  TPFE LYG  P    I L    D  IP      QQ  ++ Q L+ HL++AQ +
Sbjct: 50  YHSALNKTPFEVLYGYCPGHFGISLN---DCSIPDLNQWFQQRKLMQQLLQHHLNRAQQQ 106

Query: 185 INNM 174
           + +M
Sbjct: 107 MKHM 110


>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1611

 Score = 80.9 bits (198), Expect(2) = 6e-20
 Identities = 37/59 (62%), Positives = 47/59 (79%)
 Frame = -3

Query: 177  YADMKRTERELEVGDHVYLKLQPYRQQSTAVRACYKLSSRYYGPYEVLEKIGQVAYKLR 1
            YAD  R+ER LE+GD VYLKLQPYRQ +  +R   KL S+YYGP++V+EK+G VAYKL+
Sbjct: 1462 YADKGRSERTLELGDMVYLKLQPYRQVAMGIRGSLKLRSKYYGPFKVIEKMGAVAYKLQ 1520



 Score = 41.2 bits (95), Expect(2) = 6e-20
 Identities = 21/59 (35%), Positives = 35/59 (59%)
 Frame = -1

Query: 359  FHSSIAMTPFEALYGVKPLPIPLGP*LDSVIPAATDMMQQHAIVMQQLRDHLSKAQNRI 183
            +H+SI MTPF+ALYG  P  I       ++   A   ++  A+++Q+L+  + +AQ RI
Sbjct: 1401 YHTSIQMTPFQALYGYPPPQITEFAIPCNMSEEARVTLEDKALILQKLKSSIGEAQRRI 1459


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