BLASTX nr result

ID: Cephaelis21_contig00046597 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00046597
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P55004.1|PHYE_IPONI RecName: Full=Phytochrome E gi|1145714|gb...    74   1e-11
gb|AAM94956.1| phytochrome [Ceratodon purpureus]                       69   5e-10
sp|Q41046.1|PHY_PINSY RecName: Full=Phytochrome gi|1237084|emb|C...    68   9e-10
gb|ACN40636.1| unknown [Picea sitchensis]                              68   9e-10
ref|XP_002519749.1| phytochrome B, putative [Ricinus communis] g...    68   9e-10

>sp|P55004.1|PHYE_IPONI RecName: Full=Phytochrome E gi|1145714|gb|AAA84970.1| phytochrome E
            [Ipomoea nil]
          Length = 1115

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 33/75 (44%), Positives = 49/75 (65%)
 Frame = +3

Query: 3    YVRVQFRLAHQGEGLPFILIEQMFLRRRPCSTQQGVALNFCRELVKLMNGTVYYIRDPTS 182
            ++ +QFR+ H G+GLP  LIE M       +TQ+GV L+  ++LV++MNG V+Y+R+   
Sbjct: 1030 FIHIQFRMTHPGQGLPSALIEDMVRGGTRWTTQEGVVLHLSQKLVRMMNGHVHYVREQQK 1089

Query: 183  CYFNIGLKFRIQNSR 227
            CYF I L F+ Q  R
Sbjct: 1090 CYFLIDLDFKTQKPR 1104


>gb|AAM94956.1| phytochrome [Ceratodon purpureus]
          Length = 1126

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 35/67 (52%), Positives = 46/67 (68%)
 Frame = +3

Query: 6    VRVQFRLAHQGEGLPFILIEQMFLRRRPCSTQQGVALNFCRELVKLMNGTVYYIRDPTSC 185
            V ++FR+AH G GLP  L+ +MF R R   TQ+G+ L+ CR+LVKLMNG V YIRD    
Sbjct: 1048 VHLEFRVAHPGSGLPEELVHEMFDRGRGM-TQEGLGLSMCRKLVKLMNGEVKYIRDTGKS 1106

Query: 186  YFNIGLK 206
            YF + L+
Sbjct: 1107 YFLVNLE 1113


>sp|Q41046.1|PHY_PINSY RecName: Full=Phytochrome gi|1237084|emb|CAA65510.1| phytochrome
            [Pinus sylvestris]
          Length = 1131

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/68 (47%), Positives = 48/68 (70%)
 Frame = +3

Query: 6    VRVQFRLAHQGEGLPFILIEQMFLRRRPCSTQQGVALNFCRELVKLMNGTVYYIRDPTSC 185
            V ++FR+ H G GLP  L++ +F R +  +TQ+GV L+ CR+L+KLMNG V YIR+   C
Sbjct: 1053 VHLEFRITHPGLGLPAELVQDLFDRSQ-WATQEGVGLSMCRKLLKLMNGDVRYIRESGIC 1111

Query: 186  YFNIGLKF 209
            YF + ++F
Sbjct: 1112 YFLVNVEF 1119


>gb|ACN40636.1| unknown [Picea sitchensis]
          Length = 1132

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 31/67 (46%), Positives = 47/67 (70%)
 Frame = +3

Query: 6    VRVQFRLAHQGEGLPFILIEQMFLRRRPCSTQQGVALNFCRELVKLMNGTVYYIRDPTSC 185
            V ++FR+ H G GLP  L++ +F R R  +TQ+GV L+ CR+L+KLMNG V Y+R+   C
Sbjct: 1054 VLLEFRITHPGPGLPAELVQDLFDRSR-WTTQEGVGLSMCRKLLKLMNGDVQYVRESGKC 1112

Query: 186  YFNIGLK 206
            YF + ++
Sbjct: 1113 YFLVNVE 1119


>ref|XP_002519749.1| phytochrome B, putative [Ricinus communis]
            gi|223541166|gb|EEF42722.1| phytochrome B, putative
            [Ricinus communis]
          Length = 1131

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 31/73 (42%), Positives = 47/73 (64%)
 Frame = +3

Query: 3    YVRVQFRLAHQGEGLPFILIEQMFLRRRPCSTQQGVALNFCRELVKLMNGTVYYIRDPTS 182
            ++RVQ R+ H G+GLP  L E MF      +TQ+G+AL   R+L+  MNG V+Y R+   
Sbjct: 1042 FLRVQIRMTHPGQGLPSALTEDMFEEGNCWTTQEGLALKLSRKLLHQMNGHVHYTREHNK 1101

Query: 183  CYFNIGLKFRIQN 221
            C+F I L+ +++N
Sbjct: 1102 CFFLIDLELKLKN 1114


Top