BLASTX nr result

ID: Cephaelis21_contig00046574 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00046574
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002890245.1| SNF7 family protein [Arabidopsis lyrata subs...   145   3e-33
ref|XP_002515889.1| chmp1, putative [Ricinus communis] gi|223544...   145   3e-33
gb|AAM61431.1| developmental protein, putative [Arabidopsis thal...   143   1e-32
ref|XP_004146833.1| PREDICTED: charged multivesicular body prote...   142   2e-32
ref|NP_565053.1| SNF7-like protein [Arabidopsis thaliana] gi|297...   142   4e-32

>ref|XP_002890245.1| SNF7 family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297336087|gb|EFH66504.1| SNF7 family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 203

 Score =  145 bits (367), Expect = 3e-33
 Identities = 97/194 (50%), Positives = 117/194 (60%), Gaps = 49/194 (25%)
 Frame = +1

Query: 22  GNTDKLMNQIVELKTTARNLPCQA-KPRSV*RTKRLR----------------------- 129
           GNTDKLMNQI +LK T+++L  QA K     ++++L+                       
Sbjct: 2   GNTDKLMNQIFDLKFTSKSLQRQARKCEREEKSEKLKVKKAIEKGNMDGARIYAENAIRK 61

Query: 130 --N*INY------------------PIATVGKSLSNIVKSFESTLAAGNLQKMSETMDRF 249
               +NY                   +AT+ KS++NIVKS ESTLA GNLQKMSETMD F
Sbjct: 62  RSEQMNYLRLSSRLDAVVARLDTQAKMATITKSMTNIVKSLESTLATGNLQKMSETMDSF 121

Query: 250 EK-----EVQVEFMENSMAKSMLLSTPEDEVNTLMQQVAYEYGLEVSVGLPQPAAHAILE 414
           EK     EVQ EFMEN+MA S  LSTPE EVN+LMQQVA +YGLEVSVGLPQPA HAI  
Sbjct: 122 EKQFVNMEVQAEFMENAMAGSSSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAI-P 180

Query: 415 KNSEEKGDQDSLSR 456
            N+EEK ++D LSR
Sbjct: 181 TNTEEKVEEDDLSR 194


>ref|XP_002515889.1| chmp1, putative [Ricinus communis] gi|223544794|gb|EEF46309.1|
           chmp1, putative [Ricinus communis]
          Length = 203

 Score =  145 bits (367), Expect = 3e-33
 Identities = 95/194 (48%), Positives = 119/194 (61%), Gaps = 49/194 (25%)
 Frame = +1

Query: 22  GNTDKLMNQIVELKTTARNLPCQA-KPRSV*RTKRLR----------------------- 129
           GNT+KL+NQI++LK TA++L  QA K     ++++L+                       
Sbjct: 2   GNTEKLLNQIMDLKFTAKSLQRQARKCEKEEKSEKLKVKKAIEKGNMDGARIYAENAIRK 61

Query: 130 --N*INY------------------PIATVGKSLSNIVKSFESTLAAGNLQKMSETMDRF 249
               +NY                   + T+ KS+++IVKS ESTLA GNLQKMSETMD+F
Sbjct: 62  RTEQMNYLRLASRLDAVVARLDTQAKMTTINKSMASIVKSLESTLATGNLQKMSETMDQF 121

Query: 250 EK-----EVQVEFMENSMAKSMLLSTPEDEVNTLMQQVAYEYGLEVSVGLPQPAAHAILE 414
           EK     EVQ EFMEN+MA S  LSTPE EVN+LMQQVA +YGLEVSVGLPQPAAHA+  
Sbjct: 122 EKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAAHAVAT 181

Query: 415 KNSEEKGDQDSLSR 456
           K S+EK D+D LSR
Sbjct: 182 K-SQEKVDEDDLSR 194


>gb|AAM61431.1| developmental protein, putative [Arabidopsis thaliana]
          Length = 203

 Score =  143 bits (361), Expect = 1e-32
 Identities = 94/194 (48%), Positives = 117/194 (60%), Gaps = 49/194 (25%)
 Frame = +1

Query: 22  GNTDKLMNQIVELKTTARNLPCQAKP-------------RSV*R-------------TKR 123
           GNTDKLMNQI +LK T+++L  Q++              +++ +              ++
Sbjct: 2   GNTDKLMNQIFDLKFTSKSLQRQSRKCEKEEKAEKLKVKKAIEKGNMDGARIYAENAIRK 61

Query: 124 LRN*INY------------------PIATVGKSLSNIVKSFESTLAAGNLQKMSETMDRF 249
            R  +NY                   + T+ KS++NIVKS ES+LA GNLQKMSETMD F
Sbjct: 62  RREQMNYLRLASRLDAVVARLDTQAKMTTITKSMTNIVKSLESSLATGNLQKMSETMDSF 121

Query: 250 EK-----EVQVEFMENSMAKSMLLSTPEDEVNTLMQQVAYEYGLEVSVGLPQPAAHAILE 414
           EK     EVQ EFMEN+MA S  LSTPE EVN+LMQQVA +YGLEVSVGLPQPA HAI  
Sbjct: 122 EKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAIPT 181

Query: 415 KNSEEKGDQDSLSR 456
           K +EEK D+D LSR
Sbjct: 182 K-TEEKVDEDDLSR 194


>ref|XP_004146833.1| PREDICTED: charged multivesicular body protein 1-like [Cucumis
           sativus] gi|449476685|ref|XP_004154806.1| PREDICTED:
           charged multivesicular body protein 1-like [Cucumis
           sativus]
          Length = 203

 Score =  142 bits (359), Expect = 2e-32
 Identities = 94/194 (48%), Positives = 118/194 (60%), Gaps = 49/194 (25%)
 Frame = +1

Query: 22  GNTDKLMNQIVELKTTARNLPCQA-KPRSV*RTKRLR----------------------- 129
           GNT+KL+NQI+ELK TA++L  QA K     ++++L+                       
Sbjct: 2   GNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIRK 61

Query: 130 --N*INY------------------PIATVGKSLSNIVKSFESTLAAGNLQKMSETMDRF 249
               +NY                   ++T+ KS+ +IVKS ESTLA GNLQKMSETMD+F
Sbjct: 62  RTEQMNYLRLSSRLDAVVARLDTQAKMSTINKSMGSIVKSLESTLATGNLQKMSETMDQF 121

Query: 250 EK-----EVQVEFMENSMAKSMLLSTPEDEVNTLMQQVAYEYGLEVSVGLPQPAAHAILE 414
           EK     EVQ EFMEN+MA S  LSTPE EVN+LMQQVA +YGLEVSVGLPQPAAHA+  
Sbjct: 122 EKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAAHAVPA 181

Query: 415 KNSEEKGDQDSLSR 456
           + + EK D+D LSR
Sbjct: 182 RET-EKIDEDDLSR 194


>ref|NP_565053.1| SNF7-like protein [Arabidopsis thaliana]
           gi|297839171|ref|XP_002887467.1| SNF7 family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|5903092|gb|AAD55650.1|AC008017_23 Highly similar to
           developmental protein DG1118 [Arabidopsis thaliana]
           gi|16648963|gb|AAL24333.1| Highly similar to
           developmental protein DG1118 [Arabidopsis thaliana]
           gi|20148689|gb|AAM10235.1| similar to developmental
           protein DG1118 [Arabidopsis thaliana]
           gi|297333308|gb|EFH63726.1| SNF7 family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|332197285|gb|AEE35406.1| SNF7-like protein
           [Arabidopsis thaliana]
          Length = 203

 Score =  142 bits (357), Expect = 4e-32
 Identities = 96/194 (49%), Positives = 115/194 (59%), Gaps = 49/194 (25%)
 Frame = +1

Query: 22  GNTDKLMNQIVELKTTARNLPCQA----KPRSV*RTK----------------------- 120
           GNTDKLMNQI +LK T+++L  Q+    K     + K                       
Sbjct: 2   GNTDKLMNQIFDLKFTSKSLQRQSRKCEKEEKAEKLKVKKAIEKGNMDGARIYAENAIRK 61

Query: 121 --------RLRN*INYPIA---------TVGKSLSNIVKSFESTLAAGNLQKMSETMDRF 249
                   RL + ++  +A         T+ KS++NIVKS ES+LA GNLQKMSETMD F
Sbjct: 62  RSEQMNYLRLASRLDAVVARLDTQAKMTTITKSMTNIVKSLESSLATGNLQKMSETMDSF 121

Query: 250 EK-----EVQVEFMENSMAKSMLLSTPEDEVNTLMQQVAYEYGLEVSVGLPQPAAHAILE 414
           EK     EVQ EFMEN+MA S  LSTPE EVN+LMQQVA +YGLEVSVGLPQPA HAI  
Sbjct: 122 EKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAIPT 181

Query: 415 KNSEEKGDQDSLSR 456
           K +EEK D+D LSR
Sbjct: 182 K-TEEKVDEDDLSR 194


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