BLASTX nr result

ID: Cephaelis21_contig00045497 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00045497
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004161848.1| PREDICTED: pentatricopeptide repeat-containi...    86   4e-15
ref|XP_004137635.1| PREDICTED: pentatricopeptide repeat-containi...    86   4e-15
ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containi...    79   3e-13
ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containi...    79   3e-13
emb|CBI25399.3| unnamed protein product [Vitis vinifera]               77   1e-12

>ref|XP_004161848.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
          Length = 769

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 41/80 (51%), Positives = 56/80 (70%)
 Frame = +3

Query: 177 YVSILRNCVQTSEVRRAKAVHAKLIKGAVDGYTLLFLCNNLINAYMKCGELNDGCKLFDE 356
           YVS L+ CV TS+ R   A+HAK +KG +     LF  N+++N Y+KCG L+ G +LFDE
Sbjct: 218 YVSFLQRCVLTSDSRHGSAIHAKFLKGFLP--FSLFFHNHVLNFYVKCGRLSYGLQLFDE 275

Query: 357 MPQKNVVSWTVLIAGLGQKG 416
           MP++NVVSW+ +IAG  Q G
Sbjct: 276 MPERNVVSWSAIIAGFVQHG 295


>ref|XP_004137635.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
          Length = 769

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 41/80 (51%), Positives = 56/80 (70%)
 Frame = +3

Query: 177 YVSILRNCVQTSEVRRAKAVHAKLIKGAVDGYTLLFLCNNLINAYMKCGELNDGCKLFDE 356
           YVS L+ CV TS+ R   A+HAK +KG +     LF  N+++N Y+KCG L+ G +LFDE
Sbjct: 218 YVSFLQRCVLTSDSRHGSAIHAKFLKGFLP--FSLFFHNHVLNFYVKCGRLSYGLQLFDE 275

Query: 357 MPQKNVVSWTVLIAGLGQKG 416
           MP++NVVSW+ +IAG  Q G
Sbjct: 276 MPERNVVSWSAIIAGFVQHG 295


>ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 35/79 (44%), Positives = 52/79 (65%)
 Frame = +3

Query: 180 VSILRNCVQTSEVRRAKAVHAKLIKGAVDGYTLLFLCNNLINAYMKCGELNDGCKLFDEM 359
           V +LR+CV    +++AK VH  L+K     +  L L N++ +AY KC +++  C+LFD+M
Sbjct: 72  VDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQM 131

Query: 360 PQKNVVSWTVLIAGLGQKG 416
            Q+N  SWTVLIAGL + G
Sbjct: 132 SQRNTFSWTVLIAGLAENG 150


>ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 35/79 (44%), Positives = 52/79 (65%)
 Frame = +3

Query: 180 VSILRNCVQTSEVRRAKAVHAKLIKGAVDGYTLLFLCNNLINAYMKCGELNDGCKLFDEM 359
           V +LR+CV    +++AK VH  L+K     +  L L N++ +AY KC +++  C+LFD+M
Sbjct: 72  VDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQM 131

Query: 360 PQKNVVSWTVLIAGLGQKG 416
            Q+N  SWTVLIAGL + G
Sbjct: 132 SQRNTFSWTVLIAGLAENG 150


>emb|CBI25399.3| unnamed protein product [Vitis vinifera]
          Length = 846

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 33/79 (41%), Positives = 48/79 (60%)
 Frame = +3

Query: 180 VSILRNCVQTSEVRRAKAVHAKLIKGAVDGYTLLFLCNNLINAYMKCGELNDGCKLFDEM 359
           + +LR+C +   +R AKAVH  ++K   +   L+ L N+  + Y KC E    C +FDEM
Sbjct: 68  IDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEM 127

Query: 360 PQKNVVSWTVLIAGLGQKG 416
           PQ+NV SWTV+I G  + G
Sbjct: 128 PQRNVFSWTVMIVGSTEHG 146


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