BLASTX nr result

ID: Cephaelis21_contig00045479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00045479
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266871.1| PREDICTED: pentatricopeptide repeat-containi...    79   3e-13
ref|XP_004160564.1| PREDICTED: pentatricopeptide repeat-containi...    77   1e-12
ref|XP_004136175.1| PREDICTED: pentatricopeptide repeat-containi...    77   1e-12
ref|XP_003625900.1| Pentatricopeptide repeat-containing protein ...    70   2e-10
emb|CAN75306.1| hypothetical protein VITISV_040403 [Vitis vinifera]    66   3e-09

>ref|XP_002266871.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 468

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 39/54 (72%), Positives = 43/54 (79%)
 Frame = +2

Query: 2   LEPQNGAYYVILSNLYAEMRRWDDVEKIRRLMKEKVLKKDSGSSSVELEYHEDV 163
           LEP NGAYYV+LSN+YAEM RW DVEK+RRLMKE  L KD G SS+ELE  E V
Sbjct: 409 LEPGNGAYYVLLSNIYAEMGRWSDVEKVRRLMKEGGLTKDLGCSSIELEPQERV 462


>ref|XP_004160564.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Cucumis sativus]
          Length = 464

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 33/49 (67%), Positives = 43/49 (87%)
 Frame = +2

Query: 2   LEPQNGAYYVILSNLYAEMRRWDDVEKIRRLMKEKVLKKDSGSSSVELE 148
           +EP+NG YYV+LSN+YAEM +W +VEK+R +MKE+ LKKD GSSSVEL+
Sbjct: 410 MEPENGGYYVVLSNIYAEMGKWSEVEKVREIMKERGLKKDLGSSSVELQ 458


>ref|XP_004136175.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Cucumis sativus]
          Length = 464

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 33/49 (67%), Positives = 43/49 (87%)
 Frame = +2

Query: 2   LEPQNGAYYVILSNLYAEMRRWDDVEKIRRLMKEKVLKKDSGSSSVELE 148
           +EP+NG YYV+LSN+YAEM +W +VEK+R +MKE+ LKKD GSSSVEL+
Sbjct: 410 MEPENGGYYVVLSNIYAEMGKWSEVEKVREIMKERGLKKDLGSSSVELQ 458


>ref|XP_003625900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355500915|gb|AES82118.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 467

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 35/57 (61%), Positives = 42/57 (73%)
 Frame = +2

Query: 2   LEPQNGAYYVILSNLYAEMRRWDDVEKIRRLMKEKVLKKDSGSSSVELEYHEDVSKV 172
           LEP N AYYV LSNLYAE  RW DVE+IR +MKE+ L KD G SSVE+E+    S++
Sbjct: 409 LEPYNTAYYVQLSNLYAEAGRWSDVERIRGMMKERGLTKDLGCSSVEVEHQRHGSEL 465


>emb|CAN75306.1| hypothetical protein VITISV_040403 [Vitis vinifera]
          Length = 826

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 30/49 (61%), Positives = 39/49 (79%)
 Frame = +2

Query: 2   LEPQNGAYYVILSNLYAEMRRWDDVEKIRRLMKEKVLKKDSGSSSVELE 148
           L+PQN +YYVILSNLYAE  RW DVE++R+L+ EK LKK+ G S +E +
Sbjct: 590 LDPQNTSYYVILSNLYAEQGRWGDVERLRKLVDEKGLKKEMGYSMIEAQ 638


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