BLASTX nr result

ID: Cephaelis21_contig00045465 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00045465
         (614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278796.2| PREDICTED: homeobox protein ATH1 [Vitis vini...    72   8e-11
ref|XP_002324761.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_002278796.2| PREDICTED: homeobox protein ATH1 [Vitis vinifera]
          Length = 514

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 56/178 (31%), Positives = 84/178 (47%), Gaps = 1/178 (0%)
 Frame = -2

Query: 532 GYPFNTSLIPLSSSDLIVLHNRAQMVCGFPGPSVGQSDNYN-LQPSVHDADSGRICDSYT 356
           G   + S   L  SDL  L+++ Q + G P   + Q +  N L           I DS  
Sbjct: 22  GVSSHMSTNSLIQSDLFHLNSQNQFMIGLPVLPMLQGETINGLHADFQMTSRPAIVDSDE 81

Query: 355 LRQVQPERDPGGVFSYDASYPASNIDLQDPYMEGTPLSATSIATLLATRFDTHENPEQAA 176
           L             S   + P  + + Q+ + E T +SA+S+ATLLAT+   HEN +  A
Sbjct: 82  LVSRNS--------SLGQACPIGSTNGQEQFNEVTTISASSLATLLATKSGLHENLDNLA 133

Query: 175 SSVPLPYPLELPRSIATNDNYDLLNSSSHTTMRYRHDGLLSDTSSKWDFCNFVPHQEL 2
            S    +P E  R+  ++D  +  NSS  T++   +DG+LSD + KW F  F+P  EL
Sbjct: 134 ISATSVFPSEDLRTFVSSDCSNTSNSSLATSVDCPYDGVLSDMTRKWGFDKFLPSPEL 191


>ref|XP_002324761.1| predicted protein [Populus trichocarpa] gi|222866195|gb|EEF03326.1|
           predicted protein [Populus trichocarpa]
          Length = 204

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 6/177 (3%)
 Frame = -2

Query: 514 SLIPLSSSDLIVLHNRAQMVCGFPG-PSVGQSDNYNLQPSVHDADSGRICDSYTL----- 353
           SL+ L S +L   ++  Q + GF   P++      +L  ++H A+     +S  L     
Sbjct: 30  SLVQLDSFNL---NHHNQTLAGFTMLPTLQGEPISDLHANIHSANRSSFMNSDALVASLG 86

Query: 352 RQVQPERDPGGVFSYDASYPASNIDLQDPYMEGTPLSATSIATLLATRFDTHENPEQAAS 173
           R V  +  PG       S  A N   ++ +  G P  A  +ATL+ATR    E     A 
Sbjct: 87  RNVVGDTLPG------CSRSAGNPPFEEHFGSGIPNYA--LATLVATRSGLQETLNNLAI 138

Query: 172 SVPLPYPLELPRSIATNDNYDLLNSSSHTTMRYRHDGLLSDTSSKWDFCNFVPHQEL 2
           S P  YPLE  RS  +ND  + LNSS  +++ Y    +   T+ K DF  F    EL
Sbjct: 139 SGPSSYPLEESRSFVSNDCTNALNSSFASSLNYGCGEVFGSTNGKEDFDRFPAPIEL 195


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