BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00045422
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...   114   1e-23
gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]             106   2e-21
gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]              106   2e-21
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...   104   6e-21
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...   102   3e-20

>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score =  114 bits (284), Expect = 1e-23
 Identities = 60/172 (34%), Positives = 97/172 (56%)
 Frame = -2

Query: 517 DHCLLLLNTQPTVQKAKNRFHFDQRWIKHEGFEDVIKQAWNQPQRGSPLFQVQNRIRTCR 338
           DH  L+ N      +    F +D+RW++ EGF+D++   W+Q    +    ++ +I +CR
Sbjct: 221 DHSPLINNLVGDNWRKWAGFKYDKRWVQREGFKDLLCNFWSQQSTKTNALMME-KIASCR 279

Query: 337 VEILKWTRSVNTNSEKQIQKIKIQMERLQNQGGHRDWQQWNNLKQELNNAYEQEELFWKQ 158
            EI KW R    +S  +IQ+++ +++    Q    D ++   LK+EL+  Y  EE FW++
Sbjct: 280 REISKWKRVSKPSSAVRIQELQFKLDAATKQIPF-DRRELARLKKELSQEYNNEEQFWQE 338

Query: 157 KSRIKWLQEGDKNMKFFHAATTQRRRGNRIDSLASSKGGVCVSETDMFKEME 2
           KSRI W++ GD+N K+FHAAT  RR  NRI  L   +G    S+ D+ +  E
Sbjct: 339 KSRIMWMRNGDRNTKYFHAATKNRRAQNRIQKLIDEEGREWTSDEDLGRVAE 390


>gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]
          Length = 1270

 Score =  106 bits (265), Expect = 2e-21
 Identities = 55/164 (33%), Positives = 96/164 (58%)
 Frame = -2

Query: 517 DHCLLLLNTQPTVQKAKNRFHFDQRWIKHEGFEDVIKQAWNQPQRGSPLFQVQNRIRTCR 338
           DH  +L+    +    + +F FD+R++  E  ++ I + W++ + G+ +  V +R+R CR
Sbjct: 184 DHRPVLIKLMSSQDSYRGQFRFDKRFLFKEDVKEAIIRTWSRGKHGTNI-SVADRLRACR 242

Query: 337 VEILKWTRSVNTNSEKQIQKIKIQMERLQNQGGHRDWQQWNNLKQELNNAYEQEELFWKQ 158
             +  W +  N NS  +I +++  +E+ Q+      +Q+ + LK++L  AY +EE +WKQ
Sbjct: 243 KSLSSWKKQNNLNSLDKINQLEAALEKEQSLVWPI-FQRVSVLKKDLAKAYREEEAYWKQ 301

Query: 157 KSRIKWLQEGDKNMKFFHAATTQRRRGNRIDSLASSKGGVCVSE 26
           KSR KWL+ G++N K+FHAA  Q R+  RI+ L    G +  SE
Sbjct: 302 KSRQKWLRSGNRNSKYFHAAVKQNRQRKRIEKLKDVNGNMQTSE 345


>gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]
          Length = 1254

 Score =  106 bits (265), Expect = 2e-21
 Identities = 55/164 (33%), Positives = 96/164 (58%)
 Frame = -2

Query: 517 DHCLLLLNTQPTVQKAKNRFHFDQRWIKHEGFEDVIKQAWNQPQRGSPLFQVQNRIRTCR 338
           DH  +L+    +    + +F FD+R++  E  ++ I + W++ + G+ +  V +R+R CR
Sbjct: 187 DHRPVLIKLMSSQDSYRGQFRFDKRFLFKEDVKEAIIRTWSRGKHGTNI-SVADRLRACR 245

Query: 337 VEILKWTRSVNTNSEKQIQKIKIQMERLQNQGGHRDWQQWNNLKQELNNAYEQEELFWKQ 158
             +  W +  N NS  +I +++  +E+ Q+      +Q+ + LK++L  AY +EE +WKQ
Sbjct: 246 KSLSSWKKQNNLNSLDKINQLEAALEKEQSLVWPI-FQRVSVLKKDLAKAYREEEAYWKQ 304

Query: 157 KSRIKWLQEGDKNMKFFHAATTQRRRGNRIDSLASSKGGVCVSE 26
           KSR KWL+ G++N K+FHAA  Q R+  RI+ L    G +  SE
Sbjct: 305 KSRQKWLRSGNRNSKYFHAAVKQNRQRKRIEKLKDVNGNMQTSE 348


>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score =  104 bits (260), Expect = 6e-21
 Identities = 52/167 (31%), Positives = 84/167 (50%)
 Frame = -2

Query: 517  DHCLLLLNTQPTVQKAKNRFHFDQRWIKHEGFEDVIKQAWNQPQRGSPLFQVQNRIRTCR 338
            DH  LLL++ P +      F F+Q W  HE + DVI+++W     GS +      + +C 
Sbjct: 828  DHRPLLLDSNPKMLNKTRLFRFEQMWTTHEEYSDVIQRSWPPAFGGSAMRSWNRNLLSCG 887

Query: 337  VEILKWTRSVNTNSEKQIQKIKIQMERLQNQGGHRDWQQWNNLKQELNNAYEQEELFWKQ 158
              +  W++   +N   Q+  +   +E+L          Q N L  ++   + Q+E++W Q
Sbjct: 888  KALKMWSKEKFSNPSVQVADLLSDIEKLHQSNPPDAHHQINILTDQVTKLWTQDEMYWHQ 947

Query: 157  KSRIKWLQEGDKNMKFFHAATTQRRRGNRIDSLASSKGGVCVSETDM 17
            +SR+ WL+ GD+N  FFH  T QRR+ N+I  L    G    SE D+
Sbjct: 948  RSRVNWLKLGDQNSSFFHQTTIQRRQYNKIVRLKDDHGNWLDSEADV 994


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score =  102 bits (254), Expect = 3e-20
 Identities = 56/167 (33%), Positives = 81/167 (48%)
 Frame = -2

Query: 517 DHCLLLLNTQPTVQKAKNRFHFDQRWIKHEGFEDVIKQAWNQPQRGSPLFQVQNRIRTCR 338
           DH  ++      + + K  F FD+RWI  +G  + I Q WN    G    Q   ++  CR
Sbjct: 5   DHSPVIATIADKIPRGKQNFRFDKRWIGKDGLLEAISQGWNLDS-GFREGQFVEKLTNCR 63

Query: 337 VEILKWTRSVNTNSEKQIQKIKIQMERLQNQGGHRDWQQWNNLKQELNNAYEQEELFWKQ 158
             I KW +S+     + I+ +K +++  Q     R  ++   L   L  AY  EE +W Q
Sbjct: 64  RAISKWRKSLIPFGRQTIEDLKAELDVAQRDDD-RSREEITELTLRLKEAYRDEEQYWYQ 122

Query: 157 KSRIKWLQEGDKNMKFFHAATTQRRRGNRIDSLASSKGGVCVSETDM 17
           KSR  W++ GD N KFFHA T QRR  NRI  L    G   + + D+
Sbjct: 123 KSRSLWMKLGDNNSKFFHALTKQRRARNRITGLHDENGIWSIEDDDI 169