BLASTX nr result

ID: Cephaelis21_contig00045358 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00045358
         (924 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demis...    67   6e-09
gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    57   6e-06

>gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demissum]
          Length = 1155

 Score = 67.0 bits (162), Expect = 6e-09
 Identities = 48/156 (30%), Positives = 82/156 (52%), Gaps = 8/156 (5%)
 Frame = -3

Query: 658  VNVDGSCLGNPGSIGGGIVIRDAGGAIFLAESQFFGTGTSLMAEA-------RVCVEYHL 500
            +N DGSC+   G  GGG ++R+A G + +A +   G GTS  AEA       ++C++  +
Sbjct: 1002 LNTDGSCVN--GRCGGGGILRNALGQVIMAFTIKLGEGTSSWAEAMSMLHGMQLCIQRGV 1059

Query: 499  SNVEVETDSKVLFLLIISQNASSWPWALFSILCALKDLIRSVAVSFSHIYREANTVVDFL 320
            + +  ETDS +L    I++N S  PW ++  +  ++ ++       +H  REAN   D L
Sbjct: 1060 NMIIGETDS-ILLAKAITENWSI-PWRMYIPVKKIQKMVEEHGFIINHCLREANQPADKL 1117

Query: 319  AKFATANSCASSF-TQSTLLSYCQGLVLLDQLGCPS 215
            A  + +      F + + L S  +GLV LD++  P+
Sbjct: 1118 ASISLSTDVNHVFKSYANLPSLVKGLVNLDRMNLPT 1153


>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 50/169 (29%), Positives = 74/169 (43%), Gaps = 7/169 (4%)
 Frame = -3

Query: 679 HGN*MYMVNVDGSCLGNPGSIGGGIVIRDAGGAIFLAESQFFGTGTSLMAEARVCV---- 512
           HG  M  +N DGS +G+P     G++ R +      A +Q  G  T+L AE   C+    
Sbjct: 249 HGGCM-KINCDGSVVGSPSCGSIGVIFRASQTMFCGAFAQNIGYATALEAEYSACMFAIE 307

Query: 511 ---EYHLSNVEVETDSKVLFLLIISQNASSWPWALFSILCALKDLIRSVAVSFSHIYREA 341
              E HL+N+ +ETDS  +           W   +    C L    RS+    +H+ RE 
Sbjct: 308 KAKELHLTNIWIETDSVNVIRAFHFNTGVPWKMHIRWHNCLL--FCRSIRSLCTHVNREG 365

Query: 340 NTVVDFLAKFATANSCASSFTQSTLLSYCQGLVLLDQLGCPSIHTRISY 194
           N V D LAK    N    +   S  L++     + D LG P   +R+S+
Sbjct: 366 NLVADALAK----NGQGLALYSSHPLAFISSFYVRDCLGLP--FSRLSF 408


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