BLASTX nr result

ID: Cephaelis21_contig00045271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00045271
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550640.1| PREDICTED: pentatricopeptide repeat-containi...    87   1e-15
ref|XP_002273989.2| PREDICTED: pentatricopeptide repeat-containi...    87   1e-15
emb|CBI32643.3| unnamed protein product [Vitis vinifera]               87   1e-15
ref|XP_003624377.1| Pentatricopeptide repeat-containing protein ...    85   7e-15
ref|XP_004142220.1| PREDICTED: pentatricopeptide repeat-containi...    81   8e-14

>ref|XP_003550640.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37320-like [Glycine max]
          Length = 501

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 51/118 (43%), Positives = 68/118 (57%)
 Frame = +2

Query: 2   DHRRSHLRLIEDFLRTNSLPLPKAQNNIXXXXXXXXXXXXXXLFGLRQQGLNFCPSLLSN 181
           D R+SHLRLI+D L  N + +P   N+               L    +QG       LS 
Sbjct: 56  DRRQSHLRLIDDMLE-NYVTIPLGHNSATNGTTAEITIESSVLH--MEQGFGVDVFFLSQ 112

Query: 182 ALSLCRSQRDVTAGIQMHGLAVTKGFLYNVFVGSSLVSFYSRCRELNSARKMFEEMPL 355
           A+S C S+RD+  GIQ H LA+T GF+ +V+VGSSL+S YSRC  L  A ++FEEMP+
Sbjct: 113 AVSSCGSKRDLWGGIQYHCLAITTGFVASVYVGSSLISLYSRCAFLGDACRVFEEMPV 170


>ref|XP_002273989.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37320-like [Vitis vinifera]
          Length = 510

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 49/120 (40%), Positives = 71/120 (59%), Gaps = 2/120 (1%)
 Frame = +2

Query: 2   DHRRSHLRLIEDFLR--TNSLPLPKAQNNIXXXXXXXXXXXXXXLFGLRQQGLNFCPSLL 175
           ++R++HLRLI+DFL   TN     +A ++                  L ++      S L
Sbjct: 57  ENRQTHLRLIQDFLPIPTNQFAQKRASDDFAHSNSLEETSNMLETNFLNEEESIVDASAL 116

Query: 176 SNALSLCRSQRDVTAGIQMHGLAVTKGFLYNVFVGSSLVSFYSRCRELNSARKMFEEMPL 355
           S+ALSLC S R + +G+Q H LA+  GF+ NV+VGS L+SFYS+C EL  A ++FEEMP+
Sbjct: 117 SHALSLCASSRSLKSGVQFHCLAIRTGFVGNVYVGSCLISFYSKCGELCHAYRVFEEMPV 176


>emb|CBI32643.3| unnamed protein product [Vitis vinifera]
          Length = 1400

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 49/120 (40%), Positives = 71/120 (59%), Gaps = 2/120 (1%)
 Frame = +2

Query: 2    DHRRSHLRLIEDFLR--TNSLPLPKAQNNIXXXXXXXXXXXXXXLFGLRQQGLNFCPSLL 175
            ++R++HLRLI+DFL   TN     +A ++                  L ++      S L
Sbjct: 918  ENRQTHLRLIQDFLPIPTNQFAQKRASDDFAHSNSLEETSNMLETNFLNEEESIVDASAL 977

Query: 176  SNALSLCRSQRDVTAGIQMHGLAVTKGFLYNVFVGSSLVSFYSRCRELNSARKMFEEMPL 355
            S+ALSLC S R + +G+Q H LA+  GF+ NV+VGS L+SFYS+C EL  A ++FEEMP+
Sbjct: 978  SHALSLCASSRSLKSGVQFHCLAIRTGFVGNVYVGSCLISFYSKCGELCHAYRVFEEMPV 1037


>ref|XP_003624377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355499392|gb|AES80595.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 487

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 51/117 (43%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
 Frame = +2

Query: 2   DHRRSHLRLIEDFLR-TNSLPLPKAQNNIXXXXXXXXXXXXXXLFGLRQQGLNFCPSLLS 178
           ++RRSHLRL+ED L  T + PL      +                   +QGL      LS
Sbjct: 60  ENRRSHLRLVEDILENTTTNPLGSNLKTVTETILESSVLEM-------EQGLGIDVCFLS 112

Query: 179 NALSLCRSQRDVTAGIQMHGLAVTKGFLYNVFVGSSLVSFYSRCRELNSARKMFEEM 349
           +ALSLC S+RD   GIQ H LA+  GF+ NV+VGSSL+S YSRC  L  A ++F+EM
Sbjct: 113 HALSLCGSKRDFYGGIQYHCLAIRIGFIANVYVGSSLISLYSRCGLLGDAYRVFDEM 169


>ref|XP_004142220.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37320-like [Cucumis sativus]
           gi|449502632|ref|XP_004161699.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g37320-like [Cucumis sativus]
          Length = 524

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 49/131 (37%), Positives = 74/131 (56%), Gaps = 13/131 (9%)
 Frame = +2

Query: 2   DHRRSHLRLIEDFLRTNSLPLPKAQNNIXXXXXXXXXXXXXXLFGLRQQ----------- 148
           + R++HLRLI+DFL+T+S    ++Q                  F L Q+           
Sbjct: 64  ESRQTHLRLIQDFLQTDSGQC-RSQTLPVGCDSRSIGLSKDSSFVLDQECESGHWDVQSF 122

Query: 149 --GLNFCPSLLSNALSLCRSQRDVTAGIQMHGLAVTKGFLYNVFVGSSLVSFYSRCRELN 322
                F  + +S+ LSLC SQR++  GIQ H +A+  GF+ NV+VGSSLVS Y +C EL+
Sbjct: 123 AGRFKFNANDISSVLSLCNSQRNLRGGIQYHSVAIRTGFIANVYVGSSLVSLYGKCGELS 182

Query: 323 SARKMFEEMPL 355
           +A ++F+EMP+
Sbjct: 183 NAYRVFDEMPV 193


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