BLASTX nr result

ID: Cephaelis21_contig00045141 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00045141
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002450843.1| hypothetical protein SORBIDRAFT_05g019526 [S...    87   2e-15
gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japo...    81   8e-14
ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group] g...    81   8e-14
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    81   1e-13
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...    81   1e-13

>ref|XP_002450843.1| hypothetical protein SORBIDRAFT_05g019526 [Sorghum bicolor]
            gi|241936686|gb|EES09831.1| hypothetical protein
            SORBIDRAFT_05g019526 [Sorghum bicolor]
          Length = 1209

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 47/134 (35%), Positives = 73/134 (54%), Gaps = 3/134 (2%)
 Frame = -1

Query: 438  VSELMQDGGRSWNTELIYQTFNKRDAETFEQIPISQLGLWDKLIWHHTRNGRYTVNSAYN 259
            VSEL+     SW+ + +++ F   D ET   IP+S     D   WH+ +NG +TV SAY 
Sbjct: 1003 VSELIDSTTMSWDMQKLHEFFAPMDRETIVNIPLSTRRQSDFWAWHYDKNGIFTVRSAYR 1062

Query: 258  WLARQRSYTTSEPESSKGRQQE*AMQKR---LWGMKIKGKIKHFLRRVYHKILPTFDQLN 88
             L  +++  T+  +S  GR    A +K    LW +++  KIK FL R+  + LP+ D L+
Sbjct: 1063 MLVLRKNNMTACSDSVAGRSSTKADEKEWTALWHVQVPSKIKVFLWRLARQSLPSGDVLH 1122

Query: 87   QRGMQVDETCKVCG 46
             R ++   TC +CG
Sbjct: 1123 HRNLKAQSTCAICG 1136


>gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japonica Group]
          Length = 560

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 47/140 (33%), Positives = 69/140 (49%), Gaps = 5/140 (3%)
 Frame = -1

Query: 438 VSELMQDGGRSWNTELIYQTFNKRDAETFEQIPISQLGLWDKLIWHHTRNGRYTVNSAYN 259
           V EL+     SW+ EL+ QTF   D      IP+  + + D L WH+   G ++V SAY 
Sbjct: 198 VEELIDPSTGSWDVELLTQTFWPEDVNMIRTIPV-HIEMDDMLAWHYDEKGLFSVKSAYK 256

Query: 258 W-----LARQRSYTTSEPESSKGRQQE*AMQKRLWGMKIKGKIKHFLRRVYHKILPTFDQ 94
                 L R++  +      S  R+      K++W M++ GK+KHF+ R  H IL     
Sbjct: 257 VQRDGELQRRKRGSAGLSNGSTEREM---YWKKVWKMQLPGKVKHFIWRFSHNILALRVN 313

Query: 93  LNQRGMQVDETCKVCGKDKE 34
           L QRGM +D  C +C +  E
Sbjct: 314 LQQRGMDLDSRCIICNRMNE 333


>ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group]
            gi|113611795|dbj|BAF22173.1| Os07g0613900 [Oryza sativa
            Japonica Group]
          Length = 1453

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 47/140 (33%), Positives = 69/140 (49%), Gaps = 5/140 (3%)
 Frame = -1

Query: 438  VSELMQDGGRSWNTELIYQTFNKRDAETFEQIPISQLGLWDKLIWHHTRNGRYTVNSAYN 259
            V EL+     SW+ EL+ QTF   D      IP+  + + D L WH+   G ++V SAY 
Sbjct: 1091 VEELIDPSTGSWDVELLTQTFWPEDVNMIRTIPV-HIEMDDMLAWHYDEKGLFSVKSAYK 1149

Query: 258  W-----LARQRSYTTSEPESSKGRQQE*AMQKRLWGMKIKGKIKHFLRRVYHKILPTFDQ 94
                  L R++  +      S  R+      K++W M++ GK+KHF+ R  H IL     
Sbjct: 1150 VQRDGELQRRKRGSAGLSNGSTEREM---YWKKVWKMQLPGKVKHFIWRFSHNILALRVN 1206

Query: 93   LNQRGMQVDETCKVCGKDKE 34
            L QRGM +D  C +C +  E
Sbjct: 1207 LQQRGMDLDSRCIICNRMNE 1226


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 51/153 (33%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
 Frame = -1

Query: 483  WSNKNSEGNCCNMEW-VSELMQDGGRSWNTELIYQTFNKRDAETFEQIPISQLGLWDKLI 307
            WS K       N+   V EL+     +W+ +L+ QTF + D    + IP+  + + D L 
Sbjct: 1200 WSRKPMTPRGANLVTKVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPV-HVEMEDVLA 1258

Query: 306  WHHTRNGRYTVNSAYNWLAR--QRSYTTSEPESSKGRQQE*AMQKRLWGMKIKGKIKHFL 133
            WH    G +TV SAY       +R+     P  S     +    K+LW + + GKIKHFL
Sbjct: 1259 WHFDARGCFTVKSAYKVQREMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFL 1318

Query: 132  RRVYHKILPTFDQLNQRGMQVDETCKVCGKDKE 34
             R+ H  L     L+ RGM VD  C +CG+  E
Sbjct: 1319 WRMCHNTLALRANLHHRGMDVDTRCVMCGRYNE 1351


>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 51/153 (33%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
 Frame = -1

Query: 483  WSNKNSEGNCCNMEW-VSELMQDGGRSWNTELIYQTFNKRDAETFEQIPISQLGLWDKLI 307
            WS K       N+   V EL+     +W+ +L+ QTF + D    + IP+  + + D L 
Sbjct: 1145 WSRKPMTPRGANLVTKVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPV-HVEMEDVLA 1203

Query: 306  WHHTRNGRYTVNSAYNWLAR--QRSYTTSEPESSKGRQQE*AMQKRLWGMKIKGKIKHFL 133
            WH    G +TV SAY       +R+     P  S     +    K+LW + + GKIKHFL
Sbjct: 1204 WHFDARGCFTVKSAYKVQREMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFL 1263

Query: 132  RRVYHKILPTFDQLNQRGMQVDETCKVCGKDKE 34
             R+ H  L     L+ RGM VD  C +CG+  E
Sbjct: 1264 WRMCHNTLALRANLHHRGMDVDTRCVMCGRYNE 1296


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