BLASTX nr result

ID: Cephaelis21_contig00045085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00045085
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   131   5e-29
ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containi...   131   5e-29
ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containi...   119   2e-25
ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containi...   119   3e-25
ref|XP_002516925.1| pentatricopeptide repeat-containing protein,...   118   6e-25

>ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  131 bits (330), Expect = 5e-29
 Identities = 65/94 (69%), Positives = 78/94 (82%)
 Frame = +3

Query: 3   LLMVMARNSSFDCVEQILEKMALAGIGPSNSACIQLVDSYIKARKLREAFEFIQTVRKLK 182
           LLMVMAR   F+C+EQILE+M++AG GPSN+ CI++V S+IK+RKLREAF FIQT+RKLK
Sbjct: 136 LLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLK 195

Query: 183 FRPAFSGYTTLIGALSVVNEADLMQRLFLQMQEL 284
           FRPAFS YT LIGALS   ++D M  LF QMQEL
Sbjct: 196 FRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQEL 229


>ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  131 bits (330), Expect = 5e-29
 Identities = 65/94 (69%), Positives = 78/94 (82%)
 Frame = +3

Query: 3   LLMVMARNSSFDCVEQILEKMALAGIGPSNSACIQLVDSYIKARKLREAFEFIQTVRKLK 182
           LLMVMAR   F+C+EQILE+M++AG GPSN+ CI++V S+IK+RKLREAF FIQT+RKLK
Sbjct: 136 LLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLK 195

Query: 183 FRPAFSGYTTLIGALSVVNEADLMQRLFLQMQEL 284
           FRPAFS YT LIGALS   ++D M  LF QMQEL
Sbjct: 196 FRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQEL 229


>ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  119 bits (299), Expect = 2e-25
 Identities = 58/94 (61%), Positives = 76/94 (80%)
 Frame = +3

Query: 3   LLMVMARNSSFDCVEQILEKMALAGIGPSNSACIQLVDSYIKARKLREAFEFIQTVRKLK 182
           LLM+MAR  + + +EQILE+M++AG GPSN+ CI++V S++K+RKLREAF  I+T+RK K
Sbjct: 138 LLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFK 197

Query: 183 FRPAFSGYTTLIGALSVVNEADLMQRLFLQMQEL 284
           FRPA+S YTTLIGALS  +EAD M  L  QMQE+
Sbjct: 198 FRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEI 231


>ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  119 bits (297), Expect = 3e-25
 Identities = 62/94 (65%), Positives = 76/94 (80%)
 Frame = +3

Query: 3   LLMVMARNSSFDCVEQILEKMALAGIGPSNSACIQLVDSYIKARKLREAFEFIQTVRKLK 182
           LLMVMARN+ FD +E+ILE+M+L+G GPS++  I+LV + +K+RKLREAF+ IQT+RK K
Sbjct: 131 LLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFK 190

Query: 183 FRPAFSGYTTLIGALSVVNEADLMQRLFLQMQEL 284
           FRPAFS YT LIGALS V E D M  LF QMQEL
Sbjct: 191 FRPAFSAYTILIGALSEVREPDPMLILFHQMQEL 224


>ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544013|gb|EEF45539.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 901

 Score =  118 bits (295), Expect = 6e-25
 Identities = 60/94 (63%), Positives = 72/94 (76%)
 Frame = +3

Query: 3   LLMVMARNSSFDCVEQILEKMALAGIGPSNSACIQLVDSYIKARKLREAFEFIQTVRKLK 182
           LL+VMA+N  FD  EQIL +M++AG GPS   CI+L+ S IK+ KLRE F+ IQ +RK K
Sbjct: 134 LLLVMAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFK 193

Query: 183 FRPAFSGYTTLIGALSVVNEADLMQRLFLQMQEL 284
           FRPAFS YTTLIGALS V E+D+M  LF QMQEL
Sbjct: 194 FRPAFSAYTTLIGALSSVQESDIMLTLFHQMQEL 227