BLASTX nr result

ID: Cephaelis21_contig00045006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00045006
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283262.2| PREDICTED: pentatricopeptide repeat-containi...   140   1e-31
ref|XP_003524140.1| PREDICTED: pentatricopeptide repeat-containi...   130   8e-29
ref|XP_003532686.1| PREDICTED: pentatricopeptide repeat-containi...   130   1e-28
ref|XP_004134398.1| PREDICTED: pentatricopeptide repeat-containi...   118   4e-25
ref|XP_003576863.1| PREDICTED: pentatricopeptide repeat-containi...   111   7e-23

>ref|XP_002283262.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
           [Vitis vinifera]
          Length = 590

 Score =  140 bits (352), Expect = 1e-31
 Identities = 60/101 (59%), Positives = 83/101 (82%)
 Frame = -3

Query: 303 CLINSLGRAGQLEESESVALTMPFEPDAAVWRVLLSSCAYHGNAVLAWKMGQKLLQMIPS 124
           CL+ ++GRAGQLE++E +A+TMPFEPDAAVWR LLSSCA HG A +AW MG++L+++ P 
Sbjct: 355 CLVGTMGRAGQLEDAERIAMTMPFEPDAAVWRALLSSCAMHGAADMAWAMGRRLMELDPQ 414

Query: 123 DETAYVILLNAFASAERWDDVKDIMVMMKERNVRKKGGRSW 1
           D++AYVI+ N  A+  RWD+V ++  MMK+R V+K+GGRSW
Sbjct: 415 DDSAYVIVANVLATNGRWDEVAEVRKMMKDRMVKKEGGRSW 455


>ref|XP_003524140.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Glycine max]
          Length = 561

 Score =  130 bits (328), Expect = 8e-29
 Identities = 59/101 (58%), Positives = 76/101 (75%)
 Frame = -3

Query: 303 CLINSLGRAGQLEESESVALTMPFEPDAAVWRVLLSSCAYHGNAVLAWKMGQKLLQMIPS 124
           CL+ ++ RAG+LE +E V LTMPFEPDAAVWR LLS CAY G A  AW M +++L++ P 
Sbjct: 342 CLVGAMARAGELERAERVVLTMPFEPDAAVWRALLSVCAYRGEADKAWCMAKRVLELEPH 401

Query: 123 DETAYVILLNAFASAERWDDVKDIMVMMKERNVRKKGGRSW 1
           D+ AYV + N  +SA RWDDV ++  MMK+R V+KKGGRSW
Sbjct: 402 DDYAYVSVANVLSSAGRWDDVAELRKMMKDRRVKKKGGRSW 442


>ref|XP_003532686.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Glycine max]
          Length = 561

 Score =  130 bits (327), Expect = 1e-28
 Identities = 58/101 (57%), Positives = 76/101 (75%)
 Frame = -3

Query: 303 CLINSLGRAGQLEESESVALTMPFEPDAAVWRVLLSSCAYHGNAVLAWKMGQKLLQMIPS 124
           CL+ ++ RAG+LE +E V LTMP EPDAAVWR LLS CAY G A  AW M +++L++ P+
Sbjct: 342 CLVGAMARAGELERAERVVLTMPIEPDAAVWRALLSVCAYRGEADKAWSMAKRVLELEPN 401

Query: 123 DETAYVILLNAFASAERWDDVKDIMVMMKERNVRKKGGRSW 1
           D+ AYV + N  +SA RWDDV ++  MMK+R V+KKGGRSW
Sbjct: 402 DDYAYVSVANVLSSAGRWDDVAELRKMMKDRRVKKKGGRSW 442


>ref|XP_004134398.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
           gi|449487598|ref|XP_004157706.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 583

 Score =  118 bits (296), Expect = 4e-25
 Identities = 55/101 (54%), Positives = 76/101 (75%)
 Frame = -3

Query: 303 CLINSLGRAGQLEESESVALTMPFEPDAAVWRVLLSSCAYHGNAVLAWKMGQKLLQMIPS 124
           CLI++LGR G+LEE+E VA+TMPF PD AVWR LLSS A HG   +AW M ++LL++   
Sbjct: 351 CLIDALGRTGKLEEAERVAMTMPFVPDEAVWRALLSSSASHGAGDMAWTMAKRLLELNQH 410

Query: 123 DETAYVILLNAFASAERWDDVKDIMVMMKERNVRKKGGRSW 1
           D++AYVI+ NA + A RW++V  +  +MKER+V+K  G+SW
Sbjct: 411 DDSAYVIVSNALSVAARWEEVALVRKLMKERHVKKISGKSW 451


>ref|XP_003576863.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Brachypodium distachyon]
          Length = 574

 Score =  111 bits (277), Expect = 7e-23
 Identities = 48/101 (47%), Positives = 73/101 (72%)
 Frame = -3

Query: 303 CLINSLGRAGQLEESESVALTMPFEPDAAVWRVLLSSCAYHGNAVLAWKMGQKLLQMIPS 124
           C++ ++ R G+LE+++S+  TMP +PDAAVWR LL+ C  H  A +A  MGQ+LL++ P 
Sbjct: 354 CVVGAMARVGRLEDADSIVCTMPCKPDAAVWRTLLAGCVVHHKADMAGVMGQRLLEIDPK 413

Query: 123 DETAYVILLNAFASAERWDDVKDIMVMMKERNVRKKGGRSW 1
           D++AYV+L N +++A R DDV +    M++  VRK+GGRSW
Sbjct: 414 DDSAYVMLANVYSAAGRSDDVAEAWTAMRDHGVRKEGGRSW 454


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