BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00043753
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...    67   1e-09
ref|NP_178368.1| RNase H domain-containing protein [Arabidopsis ...    67   2e-09
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    65   8e-09
ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis ...    64   1e-08
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta...    64   1e-08

>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1715

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 26/65 (40%), Positives = 39/65 (60%)
 Frame = +1

Query: 88   EAWHLPIKLKLKHFLWKCLHGWLAANSVLRRRGMQIDATCTRCGLGEETLEHLFLHCDVS 267
            E W L I  K+KHF+W+CL G L+  + LR R +  D TC RC   +ET+ H+   C  +
Sbjct: 1387 EIWRLKITPKIKHFIWRCLSGALSTTTQLRNRNIPADPTCQRCCNADETINHIIFTCSYA 1446

Query: 268  LLIWK 282
             ++W+
Sbjct: 1447 QVVWR 1451


>ref|NP_178368.1| RNase H domain-containing protein [Arabidopsis thaliana]
           gi|3184275|gb|AAC18922.1| putative reverse transcriptase
           [Arabidopsis thaliana] gi|330250513|gb|AEC05607.1| RNase
           H domain-containing protein [Arabidopsis thaliana]
          Length = 365

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 26/63 (41%), Positives = 39/63 (61%)
 Frame = +1

Query: 94  WHLPIKLKLKHFLWKCLHGWLAANSVLRRRGMQIDATCTRCGLGEETLEHLFLHCDVSLL 273
           W L +  K+KHFLW+C+ G LA N+ LR R +  D  C RC + EET+ H+  +C  +  
Sbjct: 38  WKLHVAPKIKHFLWRCVTGALATNTRLRSRNIDADPICQRCCIEEETIHHIMFNCPYTQS 97

Query: 274 IWK 282
           +W+
Sbjct: 98  VWR 100


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 30/62 (48%), Positives = 35/62 (56%)
 Frame = +1

Query: 94   WHLPIKLKLKHFLWKCLHGWLAANSVLRRRGMQIDATCTRCGLGEETLEHLFLHCDVSLL 273
            W   I  K+K F WK +H  LA  + +R+RGM ID  C RCG  EET EHL   CD S  
Sbjct: 1055 WKAKIPPKVKLFSWKAIHNGLAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWGCDESSR 1114

Query: 274  IW 279
             W
Sbjct: 1115 AW 1116


>ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis thaliana]
           gi|6682231|gb|AAF23283.1|AC016661_8 putative non-LTR
           reverse transcriptase [Arabidopsis thaliana]
           gi|332641254|gb|AEE74775.1| RNase H domain-containing
           protein [Arabidopsis thaliana]
          Length = 484

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 28/64 (43%), Positives = 37/64 (57%)
 Frame = +1

Query: 94  WHLPIKLKLKHFLWKCLHGWLAANSVLRRRGMQIDATCTRCGLGEETLEHLFLHCDVSLL 273
           W+LPI  KLKHFLW+ L   LA    L  RGM+ID +C RC    E++ H    C  + +
Sbjct: 163 WNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATM 222

Query: 274 IWKL 285
            W+L
Sbjct: 223 AWRL 226


>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1750

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 28/64 (43%), Positives = 37/64 (57%)
 Frame = +1

Query: 94   WHLPIKLKLKHFLWKCLHGWLAANSVLRRRGMQIDATCTRCGLGEETLEHLFLHCDVSLL 273
            W+LPI  KLKHFLW+ L   LA    L  RGM+ID +C RC    E++ H    C  + +
Sbjct: 1429 WNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATM 1488

Query: 274  IWKL 285
             W+L
Sbjct: 1489 AWRL 1492