BLASTX nr result

ID: Cephaelis21_contig00043605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00043605
         (216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||T08550 choline monooxygenase (EC 1.1.3.-) precursor - Arabi...    69   4e-10
ref|XP_002308100.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10
dbj|BAC21260.1| choline monooxygenase [Arabidopsis thaliana]           68   9e-10
ref|NP_194718.2| choline monooxygenase [Arabidopsis thaliana] gi...    68   9e-10
ref|XP_002869406.1| predicted protein [Arabidopsis lyrata subsp....    67   2e-09

>pir||T08550 choline monooxygenase (EC 1.1.3.-) precursor - Arabidopsis thaliana
           gi|4914413|emb|CAB43664.1| choline monooxygenase-like
           protein [Arabidopsis thaliana]
           gi|7269888|emb|CAB79747.1| choline monooxygenase-like
           protein [Arabidopsis thaliana]
          Length = 426

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 33/47 (70%), Positives = 37/47 (78%)
 Frame = +3

Query: 75  FNLIEKMHEKVSIQKCGGDSMKSEQDFDRLGSEALYAFVYPNFMINR 215
           + L  ++ EKVSIQ+CGG S   E  FDRLGSEALYAFVYPNFMINR
Sbjct: 288 YGLRYQIFEKVSIQECGGGSKVGEDGFDRLGSEALYAFVYPNFMINR 334


>ref|XP_002308100.1| predicted protein [Populus trichocarpa] gi|222854076|gb|EEE91623.1|
           predicted protein [Populus trichocarpa]
          Length = 409

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/42 (73%), Positives = 35/42 (83%)
 Frame = +3

Query: 90  KMHEKVSIQKCGGDSMKSEQDFDRLGSEALYAFVYPNFMINR 215
           K +EKVSIQ C G S +SE D DRLGS+ALYAF+YPNFMINR
Sbjct: 275 KTYEKVSIQSCDGGSTESEDDIDRLGSKALYAFIYPNFMINR 316


>dbj|BAC21260.1| choline monooxygenase [Arabidopsis thaliana]
          Length = 422

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/39 (82%), Positives = 33/39 (84%)
 Frame = +3

Query: 99  EKVSIQKCGGDSMKSEQDFDRLGSEALYAFVYPNFMINR 215
           EKVSIQ+CGG S   E  FDRLGSEALYAFVYPNFMINR
Sbjct: 292 EKVSIQECGGGSKVGEDGFDRLGSEALYAFVYPNFMINR 330


>ref|NP_194718.2| choline monooxygenase [Arabidopsis thaliana]
           gi|20138061|sp|Q9SZR0.2|CHMO_ARATH RecName: Full=Choline
           monooxygenase, chloroplastic; Flags: Precursor
           gi|114050629|gb|ABI49464.1| At4g29890 [Arabidopsis
           thaliana] gi|332660289|gb|AEE85689.1| choline
           monooxygenase [Arabidopsis thaliana]
          Length = 422

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/39 (82%), Positives = 33/39 (84%)
 Frame = +3

Query: 99  EKVSIQKCGGDSMKSEQDFDRLGSEALYAFVYPNFMINR 215
           EKVSIQ+CGG S   E  FDRLGSEALYAFVYPNFMINR
Sbjct: 292 EKVSIQECGGGSKVGEDGFDRLGSEALYAFVYPNFMINR 330


>ref|XP_002869406.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297315242|gb|EFH45665.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 422

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 31/39 (79%), Positives = 33/39 (84%)
 Frame = +3

Query: 99  EKVSIQKCGGDSMKSEQDFDRLGSEALYAFVYPNFMINR 215
           EKVSIQ+CGG S   E  FDRLGS+ALYAFVYPNFMINR
Sbjct: 292 EKVSIQECGGGSKVGEDGFDRLGSQALYAFVYPNFMINR 330


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