BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00043528
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD37019.2| putative non-LTR retrolelement reverse transcript...   129   5e-28
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...   123   2e-26
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...   122   6e-26
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...   114   2e-23
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]             110   2e-22

>gb|AAD37019.2| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 855

 Score =  129 bits (323), Expect = 5e-28
 Identities = 74/196 (37%), Positives = 102/196 (52%), Gaps = 6/196 (3%)
 Frame = -1

Query: 570  GSERNKERWSGGSLN-----ERIDRALSNLEFLELFSCVQVHHLMRIKSDHRPLLIQTET 406
            G + NK  W  G +      +R+DR L   +    +    V HL    SDH P+ IQ E 
Sbjct: 587  GFKGNKFTWKRGRVESTFVAKRLDRVLCRPQTRLKWQEASVTHLPFFASDHAPIYIQLEP 646

Query: 405  DLSSGS-QRPFRFLSSWLLHQDFNNMVANSWKENGTLMDTVKGFTEIAKVWNMEVFGHIV 229
            ++ S   +RPFRF ++WL H  F +++  SW   G     +       K WN EVFG + 
Sbjct: 647  EVRSNPLRRPFRFEAAWLTHSGFKDLLQASWNTEGETPVALAALKSKLKKWNREVFGDVN 706

Query: 228  QRKNRTIAKIKGAQEALERKSNRFLANLEKELRTELEGILDQEEALWKQKSCCDWLALGD 49
            +RK   + +IK  QE LE      L + E+EL  E + +L+QEE LW QKS   W+ LGD
Sbjct: 707  RRKESLMNEIKVVQELLEINQTDNLLSKEEELIKEFDVVLEQEEVLWFQKSREKWVELGD 766

Query: 48   RNTKFFHNKVKARRRK 1
            RNTK+FH     RRR+
Sbjct: 767  RNTKYFHTMTVVRRRR 782


>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score =  123 bits (308), Expect = 2e-26
 Identities = 75/183 (40%), Positives = 99/183 (54%), Gaps = 2/183 (1%)
 Frame = -1

Query: 543 SGGSL-NERIDRALSNLEFLELFSCVQVHHLMRIKSDHRPLLIQTETDLSSGSQRPFRFL 367
           +GGSL  ER+DRAL N E+L+LF   +V HL R  SDH PLLI    +  S S  PFR  
Sbjct: 189 TGGSLIKERLDRALVNSEWLDLFPDTKVIHLPRTFSDHCPLLILFNENPRSESF-PFRCK 247

Query: 366 SSWLLHQDFNNMVANSWKENGTLMDTVKG-FTEIAKVWNMEVFGHIVQRKNRTIAKIKGA 190
             W  H DF N++  +W  +       +  F    K W+  VFG I Q+K R +A++ G 
Sbjct: 248 EVWAYHPDFTNVIEETWGSHHNSYVAARDLFLSSVKSWSKYVFGSIFQKKKRILARLGGI 307

Query: 189 QEALERKSNRFLANLEKELRTELEGILDQEEALWKQKSCCDWLALGDRNTKFFHNKVKAR 10
           Q++L    + FL+ LE +L  EL  +  QE   W QK+  D   LGD NTK+FH   K R
Sbjct: 308 QKSLSIHPSVFLSKLEIDLLVELNELSKQERVFWAQKAGIDRAKLGDMNTKYFHTLAKIR 367

Query: 9   RRK 1
             K
Sbjct: 368 TCK 370


>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
           [Medicago truncatula]
          Length = 1296

 Score =  122 bits (305), Expect = 6e-26
 Identities = 70/178 (39%), Positives = 104/178 (58%), Gaps = 2/178 (1%)
 Frame = -1

Query: 531 LNERIDRALSNLEFLELFSCVQVHHLMRIKSDHRPLLIQTETDLSSGSQRPFRFLSSWLL 352
           L++++DR ++N+++   F    V  L R+ SDH PLL++      +   RPFRF ++W+ 
Sbjct: 191 LSKKLDRGMANVDWRLSFPEAFVEVLCRLHSDHNPLLLRFGGLPLTRGPRPFRFEAAWID 250

Query: 351 HQDFNNMVANSWKEN--GTLMDTVKGFTEIAKVWNMEVFGHIVQRKNRTIAKIKGAQEAL 178
           H D+ N+V  SW  +        +K   E + ++N +VFG+I QRK+R   ++KG Q  L
Sbjct: 251 HYDYGNVVKRSWSTHTHNPTASLIK-VMENSIIFNHDVFGNIFQRKSRVEWRLKGVQSYL 309

Query: 177 ERKSNRFLANLEKELRTELEGILDQEEALWKQKSCCDWLALGDRNTKFFHNKVKARRR 4
           ER  +     LEKEL+ E   IL QEE LW QKS   W+ LGD+NT FFH +   RR+
Sbjct: 310 ERVDSYRHTLLEKELQDEYNHILFQEEMLWYQKSREQWVKLGDKNTAFFHAQTVIRRK 367


>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score =  114 bits (284), Expect = 2e-23
 Identities = 66/180 (36%), Positives = 97/180 (53%), Gaps = 6/180 (3%)
 Frame = -1

Query: 522 RIDRALSNLEFLELFSCVQVHHLMRIKSDHRPLLIQTETDLSSGSQ------RPFRFLSS 361
           R+DR L+N E+   F+   V +L + +SDH P+LI T     SG        +PFRF ++
Sbjct: 197 RLDRGLANSEWKLKFTEGVVRNLPKSQSDHCPILIST-----SGFAPVPRIIKPFRFQAA 251

Query: 360 WLLHQDFNNMVANSWKENGTLMDTVKGFTEIAKVWNMEVFGHIVQRKNRTIAKIKGAQEA 181
           WL HQ F   V  +W  +  ++  +K F +    WN E F +I ++K+   A+I G Q  
Sbjct: 252 WLNHQVFCEFVRKNWNADAPIVPFLKSFADKLNKWNKEEFYNIFRKKSELWARISGVQAL 311

Query: 180 LERKSNRFLANLEKELRTELEGILDQEEALWKQKSCCDWLALGDRNTKFFHNKVKARRRK 1
           L       L  LE +LR E++ +LD EE LW QKS  + +  GDRNT++FH     RR +
Sbjct: 312 LSTGRQNHLIKLEAKLRREMDIVLDDEETLWFQKSRMEAICDGDRNTRYFHLSTVIRRSR 371


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score =  110 bits (274), Expect = 2e-22
 Identities = 64/176 (36%), Positives = 96/176 (54%), Gaps = 2/176 (1%)
 Frame = -1

Query: 522  RIDRALSNLEFLELFSCVQVHHLMRIKSDHRPLLIQTET-DLSSGSQRPFRFLSSWLLHQ 346
            R+DR L N+     F   +V  L R+ SDH P+L   E  +    S RP RF ++WL  +
Sbjct: 727  RLDRVLWNVSAQLTFPEAKVSVLPRLCSDHNPILFLDEAGNPPDRSLRPVRFEAAWLTSE 786

Query: 345  DFNNMVANSWKENGT-LMDTVKGFTEIAKVWNMEVFGHIVQRKNRTIAKIKGAQEALERK 169
            D+ ++   + +  G+ L D +   T+ + +WN  VFG+I  RK +   +I G Q A    
Sbjct: 787  DYKHIWKEATEREGSNLEDIIATATQKSLLWNRNVFGNIFNRKRKIENRILGIQRAWNYN 846

Query: 168  SNRFLANLEKELRTELEGILDQEEALWKQKSCCDWLALGDRNTKFFHNKVKARRRK 1
            ++  L +LEK L +EL  +L QEE LW QK+  DW+  GDRNT F+H     +R +
Sbjct: 847  TSVRLQDLEKRLLSELNEVLVQEETLWFQKARTDWIRNGDRNTTFYHRSALIKRNR 902