BLASTX nr result
ID: Cephaelis21_contig00043364
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00043364
(555 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat... 202 2e-50
emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera] 199 3e-49
ref|XP_002307160.1| predicted protein [Populus trichocarpa] gi|2... 166 3e-39
ref|XP_002534039.1| pentatricopeptide repeat-containing protein,... 157 8e-37
ref|XP_003592708.1| Pentatricopeptide repeat protein-like protei... 149 4e-34
>ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial [Vitis vinifera]
gi|296085293|emb|CBI29025.3| unnamed protein product
[Vitis vinifera]
Length = 854
Score = 202 bits (515), Expect = 2e-50
Identities = 100/184 (54%), Positives = 138/184 (75%)
Frame = +2
Query: 2 DKAFQLFGRMQKTGITPDISLFDVLIVGLCKEKEIDKALQLYSQMNKLGIQPDVKILAKL 181
DKA QLF +MQK+G PD+S++D LI GLC +KEI+KAL L S+M +LGI PD++IL+KL
Sbjct: 320 DKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKL 379
Query: 182 VSCAPNEKDMSWLLEDRPQDLDGKSILLLYNSLLKGLVNIDAVDRAYGLLRSTMGYGSTI 361
++ E D+ L+E+R +DLD +++LLLYNS+L GLVN +VD+AY LLR+ G T
Sbjct: 380 IAYCSEEVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLRAMTGDNYTD 439
Query: 362 DVEGDKLFAIKELVTPNTTSFEIIVDGLCSVDKFDKALGLFRNMDGINCQHSVLLYNNMI 541
+ E +K F +KE+V P+TTSF I++DGLC+ K D AL LFR+M + C+ +VLLYNN+I
Sbjct: 440 NFEVNKFFMVKEMVRPDTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLI 499
Query: 542 DHLS 553
D LS
Sbjct: 500 DKLS 503
Score = 58.9 bits (141), Expect = 5e-07
Identities = 44/166 (26%), Positives = 69/166 (41%), Gaps = 2/166 (1%)
Frame = +2
Query: 2 DKAFQLFGRMQKTGITPDISLFDVLIVGLCKEKEIDKALQLYSQMNKLGIQPDVKILAKL 181
D+A ++F + G PD+ ++ LI G CK K + +A + +M G+ P V L
Sbjct: 614 DQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLL 673
Query: 182 VS--CAPNEKDMSWLLEDRPQDLDGKSILLLYNSLLKGLVNIDAVDRAYGLLRSTMGYGS 355
+ C + D ++ R + + ++ Y +L+ GL N D A L G G
Sbjct: 674 IDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKG- 732
Query: 356 TIDVEGDKLFAIKELVTPNTTSFEIIVDGLCSVDKFDKALGLFRNM 493
+PN SF ++ GLC D AL FR M
Sbjct: 733 ---------------CSPNRISFIALIHGLCKCGWPDAALLYFREM 763
Score = 55.5 bits (132), Expect = 6e-06
Identities = 46/185 (24%), Positives = 80/185 (43%), Gaps = 3/185 (1%)
Frame = +2
Query: 5 KAFQLFGRMQKTGITPDISLFDVLIVGLCKEKEIDKALQLYSQMNKLGIQPDVKILAKLV 184
+A M + G PDI + I G K K +D+AL+++ + G PDV L+
Sbjct: 580 EACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLI 639
Query: 185 SCAPNEKDMSWLLEDRPQDLDGKSI---LLLYNSLLKGLVNIDAVDRAYGLLRSTMGYGS 355
+ K +S D ++ K + ++ YN L+ G +D+A+ L +G
Sbjct: 640 NGFCKVKRVS-EAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVG--- 695
Query: 356 TIDVEGDKLFAIKELVTPNTTSFEIIVDGLCSVDKFDKALGLFRNMDGINCQHSVLLYNN 535
KE PN ++ ++DGLC+ + D A+ L+ M G C + + +
Sbjct: 696 ------------KER-EPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIA 742
Query: 536 MIDHL 550
+I L
Sbjct: 743 LIHGL 747
>emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]
Length = 814
Score = 199 bits (505), Expect = 3e-49
Identities = 99/184 (53%), Positives = 135/184 (73%)
Frame = +2
Query: 2 DKAFQLFGRMQKTGITPDISLFDVLIVGLCKEKEIDKALQLYSQMNKLGIQPDVKILAKL 181
DKA QLF +MQK+G PD+S++D LI GLC +KEI+KAL L S+M +LGI PD++IL+KL
Sbjct: 280 DKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKL 339
Query: 182 VSCAPNEKDMSWLLEDRPQDLDGKSILLLYNSLLKGLVNIDAVDRAYGLLRSTMGYGSTI 361
+ E D+ L+E+R +DLD +++LLLYNS+L GLVN +VD+AY LL + G T
Sbjct: 340 IPYCSEEVDIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLXAMTGDNYTD 399
Query: 362 DVEGDKLFAIKELVTPNTTSFEIIVDGLCSVDKFDKALGLFRNMDGINCQHSVLLYNNMI 541
+ E +K F +KE+V P TTSF I++DGLC+ K D AL LFR+M + C+ +VLLYNN+I
Sbjct: 400 NFEVNKFFMVKEMVRPXTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLI 459
Query: 542 DHLS 553
D LS
Sbjct: 460 DKLS 463
Score = 58.9 bits (141), Expect = 5e-07
Identities = 44/166 (26%), Positives = 69/166 (41%), Gaps = 2/166 (1%)
Frame = +2
Query: 2 DKAFQLFGRMQKTGITPDISLFDVLIVGLCKEKEIDKALQLYSQMNKLGIQPDVKILAKL 181
D+A ++F + G PD+ ++ LI G CK K + +A + +M G+ P V L
Sbjct: 574 DQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLL 633
Query: 182 VS--CAPNEKDMSWLLEDRPQDLDGKSILLLYNSLLKGLVNIDAVDRAYGLLRSTMGYGS 355
+ C + D ++ R + + ++ Y +L+ GL N D A L G G
Sbjct: 634 IDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKG- 692
Query: 356 TIDVEGDKLFAIKELVTPNTTSFEIIVDGLCSVDKFDKALGLFRNM 493
+PN SF ++ GLC D AL FR M
Sbjct: 693 ---------------CSPNRISFIALIHGLCKCGWPDAALLYFREM 723
Score = 55.5 bits (132), Expect = 6e-06
Identities = 46/185 (24%), Positives = 80/185 (43%), Gaps = 3/185 (1%)
Frame = +2
Query: 5 KAFQLFGRMQKTGITPDISLFDVLIVGLCKEKEIDKALQLYSQMNKLGIQPDVKILAKLV 184
+A M + G PDI + I G K K +D+AL+++ + G PDV L+
Sbjct: 540 EACNFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLI 599
Query: 185 SCAPNEKDMSWLLEDRPQDLDGKSI---LLLYNSLLKGLVNIDAVDRAYGLLRSTMGYGS 355
+ K +S D ++ K + ++ YN L+ G +D+A+ L +G
Sbjct: 600 NGFCKVKRVS-EAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVG--- 655
Query: 356 TIDVEGDKLFAIKELVTPNTTSFEIIVDGLCSVDKFDKALGLFRNMDGINCQHSVLLYNN 535
KE PN ++ ++DGLC+ + D A+ L+ M G C + + +
Sbjct: 656 ------------KER-EPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIA 702
Query: 536 MIDHL 550
+I L
Sbjct: 703 LIHGL 707
>ref|XP_002307160.1| predicted protein [Populus trichocarpa] gi|222856609|gb|EEE94156.1|
predicted protein [Populus trichocarpa]
Length = 726
Score = 166 bits (419), Expect = 3e-39
Identities = 87/183 (47%), Positives = 122/183 (66%)
Frame = +2
Query: 2 DKAFQLFGRMQKTGITPDISLFDVLIVGLCKEKEIDKALQLYSQMNKLGIQPDVKILAKL 181
DKA LF +M+K+G TPDISL+DV+I GLC K++ KAL LYS+M IQPDVKI+ KL
Sbjct: 187 DKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVKKALCLYSEMKGFKIQPDVKIVTKL 246
Query: 182 VSCAPNEKDMSWLLEDRPQDLDGKSILLLYNSLLKGLVNIDAVDRAYGLLRSTMGYGSTI 361
+S E++++ E+ +D+D K+ LLYNS+L LV+ +V +AY LL++
Sbjct: 247 ISSFSKEEELTCFFEEMHEDMDPKASTLLYNSVLNSLVDNGSVHKAYHLLQAITIGNCIG 306
Query: 362 DVEGDKLFAIKELVTPNTTSFEIIVDGLCSVDKFDKALGLFRNMDGINCQHSVLLYNNMI 541
D E KLF K +V PN+T+F I+++GL D A+GLFR+M I C+ +LLYNN+I
Sbjct: 307 DGEIGKLFRGKAMVPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLI 366
Query: 542 DHL 550
D L
Sbjct: 367 DGL 369
Score = 55.5 bits (132), Expect = 6e-06
Identities = 49/220 (22%), Positives = 81/220 (36%), Gaps = 37/220 (16%)
Frame = +2
Query: 2 DKAFQLFGRMQKTGITPDISLFDVLIVGLCKEKEIDKALQLYSQMNKLGIQPDVKILAKL 181
D A LF M + G PD+ L++ LI GLC + ++ L +M + GI+P +
Sbjct: 341 DLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFTNNCI 400
Query: 182 VSCAPNEKDMS----------------WLLED----RPQDLDGKSI-------------- 259
C D+S W+ + GK +
Sbjct: 401 FGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEGF 460
Query: 260 ---LLLYNSLLKGLVNIDAVDRAYGLLRSTMGYGSTIDVEGDKLFAIKELVTPNTTSFEI 430
++ Y++ L GL+ I VD+A L + G P+ ++ I
Sbjct: 461 QPDIVAYSACLDGLIKIQEVDQALKLFQDICAQG----------------YCPDVIAYNI 504
Query: 431 IVDGLCSVDKFDKALGLFRNMDGINCQHSVLLYNNMIDHL 550
++ GLC + +A L M+ S + YN +ID L
Sbjct: 505 LIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGL 544
>ref|XP_002534039.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223525946|gb|EEF28343.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 634
Score = 157 bits (398), Expect = 8e-37
Identities = 86/183 (46%), Positives = 122/183 (66%)
Frame = +2
Query: 2 DKAFQLFGRMQKTGITPDISLFDVLIVGLCKEKEIDKALQLYSQMNKLGIQPDVKILAKL 181
DK QLF +MQK G++PDISL+DVLI G C K++DKAL LY++M L IQPD+ +++KL
Sbjct: 96 DKGVQLFYKMQKYGLSPDISLYDVLIGGFCSNKKLDKALSLYAEMKMLKIQPDIGVVSKL 155
Query: 182 VSCAPNEKDMSWLLEDRPQDLDGKSILLLYNSLLKGLVNIDAVDRAYGLLRSTMGYGSTI 361
+S P E + +LE+ +D++ ++ LL NS+L LVN +D+A LLR+ MG G
Sbjct: 156 ISSFPEEGKLIDILEETLEDMNIETQTLLCNSVLSSLVNSGLIDKACCLLRNMMGNGDDD 215
Query: 362 DVEGDKLFAIKELVTPNTTSFEIIVDGLCSVDKFDKALGLFRNMDGINCQHSVLLYNNMI 541
DV+ KLF E + PNT SF I+++GL K D A+ LF++M I C +LLYNN+I
Sbjct: 216 DVQ-YKLFR-DEKIRPNTASFSIVINGLMQACKLDLAVCLFQDMAEIGCNRDLLLYNNLI 273
Query: 542 DHL 550
+ L
Sbjct: 274 NGL 276
>ref|XP_003592708.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355481756|gb|AES62959.1| Pentatricopeptide repeat
protein-like protein [Medicago truncatula]
Length = 1430
Score = 149 bits (375), Expect = 4e-34
Identities = 81/190 (42%), Positives = 125/190 (65%), Gaps = 7/190 (3%)
Frame = +2
Query: 2 DKAFQLFGRMQKT-GITPDISLFDVLIVGLCKEKEIDKALQLYSQMNKLGIQPDVKILAK 178
DKA QLF +M++ TPD+SL+DVLI GLCK K+ D+A+ L+S+M + G++PD+ IL K
Sbjct: 282 DKALQLFDKMRREDSFTPDVSLYDVLIGGLCKNKDTDRAISLFSEMKEFGVRPDIGILTK 341
Query: 179 LVSCAPNEKDM-SWLLEDRPQ-DLDGKSILLLYNSLLKGLVNIDAVDRAYGLLRSTMGYG 352
L+SC + K M S LLE+ P+ + D ++++L+YN+LL VN +D AY L+R +
Sbjct: 342 LISCFSDSKSMVSRLLEEIPEGEEDEQTLVLIYNALLTCYVNDGLMDEAYRLIRMMIQSK 401
Query: 353 STIDVEGDKL----FAIKELVTPNTTSFEIIVDGLCSVDKFDKALGLFRNMDGINCQHSV 520
S+ D + +++ +K +V PN TSF I++DG D+ D AL LF +M + ++
Sbjct: 402 SSTDSDENRMDVFFKTVKRMVFPNITSFSIVIDGFLKNDQLDLALSLFNDMRRFVDKPTI 461
Query: 521 LLYNNMIDHL 550
L+YNN+ID L
Sbjct: 462 LIYNNLIDSL 471
Score = 64.7 bits (156), Expect = 9e-09
Identities = 53/218 (24%), Positives = 87/218 (39%), Gaps = 37/218 (16%)
Frame = +2
Query: 2 DKAFQLFGRMQKTGITPDISLFDVLIVGLCKEKEIDKALQLYSQMNKLGIQPDVKILAKL 181
D A LF M++ P I +++ LI LCK ++K+ +L +M +LGI+P +
Sbjct: 443 DLALSLFNDMRRFVDKPTILIYNNLIDSLCKSNRLEKSYELLREMKELGIEPTHFTYNSI 502
Query: 182 VSCAPNEKDMS----------------WL---------LEDRPQDLDGKSIL-------- 262
C KD+S W+ L D + ++ L
Sbjct: 503 YGCLCKRKDVSAACVMLKEMGSCGHGPWIKHTTLLVKELCDHGRVIEACEFLDNMTQQGF 562
Query: 263 ----LLYNSLLKGLVNIDAVDRAYGLLRSTMGYGSTIDVEGDKLFAIKELVTPNTTSFEI 430
+ Y++ + GLVNI VD A + + +G P+ F +
Sbjct: 563 LPDIVSYSAAIGGLVNIQEVDHAMKIFKDLWSHGHC----------------PDVVCFNV 606
Query: 431 IVDGLCSVDKFDKALGLFRNMDGINCQHSVLLYNNMID 544
++ GLC V++F +A LF + SV+ YN ID
Sbjct: 607 LIRGLCKVNRFTEAEDLFHELVKRGLSPSVVTYNLFID 644