BLASTX nr result
ID: Cephaelis21_contig00043363
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00043363
(709 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAD66751.1| orf764 [Beta vulgaris subsp. vulgaris] 102 4e-29
ref|NP_063998.1| orf764 gene product (mitochondrion) [Beta vulga... 102 4e-29
gb|AAD20433.1| putative retroelement pol polyprotein [Arabidopsi... 97 9e-28
gb|AFU25705.1| gag-pol precursor [Castanea mollissima] 92 9e-27
gb|AAY99339.1| pol-polyprotein [Silene latifolia] 92 2e-26
>dbj|BAD66751.1| orf764 [Beta vulgaris subsp. vulgaris]
Length = 764
Score = 102 bits (254), Expect(2) = 4e-29
Identities = 54/116 (46%), Positives = 74/116 (63%)
Frame = +1
Query: 325 VYFSASNNEAEYEAFIVGIQISHKLGKKKLQAYDDSQLVANQVNGSYEAKDTVMRKYLDN 504
+ F ASNNEAEYEA I GI++ KK++ DSQLVA+Q+ G YEA++ M+KYL
Sbjct: 228 IKFKASNNEAEYEAAIAGIKMCMAADAKKIRLQTDSQLVASQIRGEYEAREPAMQKYLQM 287
Query: 505 VHSLFSLFEEFRMNRVPHSQNSKTDALSKLAFSAYTHLTKSVLVEVLSQRSIEYKE 672
+ L + + VP + NS+ DALSKLA S L ++V+VEV+ QRSI+ E
Sbjct: 288 IKDLAAQLISLEVVLVPRADNSQADALSKLASSTLQDLNRTVMVEVMEQRSIDKAE 343
Score = 52.0 bits (123), Expect(2) = 4e-29
Identities = 32/107 (29%), Positives = 53/107 (49%)
Frame = +2
Query: 8 LKQILLRPEASGRLVNWVIELGEHDITFFPRTAVKKQTLTDFLPKSPQPDVK*NPEEEQA 187
L++ L + + SGRL+ W +EL E ++ + PRTA+K Q L DF+ V+ + EEE+
Sbjct: 140 LEKALQKLDTSGRLLRWAVELSEFEVEYKPRTAIKAQALADFI-------VEASYEEEEE 192
Query: 188 QEAKQSRLCEEDWWMLFIDEASGIEKAGLLVIVIDPVGAEVTYTLWF 328
W L +D ++ +G +I+ P G Y + F
Sbjct: 193 PVGV---------WKLAVDGSAAQTGSGAGIIMTSPEGNVFEYAIKF 230
>ref|NP_063998.1| orf764 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
gi|323435157|ref|YP_004222375.1| hypothetical protein
BevumaM_p142 [Beta vulgaris subsp. maritima]
gi|346683249|ref|YP_004842181.1| hypothetical protein
BemaM_p137 [Beta macrocarpa] gi|9049300|dbj|BAA99310.1|
orf764 [Beta vulgaris subsp. vulgaris]
gi|317905608|emb|CBJ14014.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|319439890|emb|CBJ17590.1|
hypothetical protein [Beta vulgaris subsp. maritima]
gi|320148045|emb|CBJ20708.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|345500167|emb|CBX24986.1|
hypothetical protein [Beta macrocarpa]
gi|384977907|emb|CBL54131.1| hypothetical protein
(mitochondrion) [Beta vulgaris subsp. maritima]
Length = 764
Score = 102 bits (254), Expect(2) = 4e-29
Identities = 54/116 (46%), Positives = 74/116 (63%)
Frame = +1
Query: 325 VYFSASNNEAEYEAFIVGIQISHKLGKKKLQAYDDSQLVANQVNGSYEAKDTVMRKYLDN 504
+ F ASNNEAEYEA I GI++ KK++ DSQLVA+Q+ G YEA++ M+KYL
Sbjct: 228 IKFKASNNEAEYEAAIAGIKMCMAADAKKIRLQTDSQLVASQIRGEYEAREPAMQKYLQM 287
Query: 505 VHSLFSLFEEFRMNRVPHSQNSKTDALSKLAFSAYTHLTKSVLVEVLSQRSIEYKE 672
+ L + + VP + NS+ DALSKLA S L ++V+VEV+ QRSI+ E
Sbjct: 288 IKDLAAQLISLEVVLVPRADNSQADALSKLASSTLQDLNRTVMVEVMEQRSIDKAE 343
Score = 52.0 bits (123), Expect(2) = 4e-29
Identities = 32/107 (29%), Positives = 53/107 (49%)
Frame = +2
Query: 8 LKQILLRPEASGRLVNWVIELGEHDITFFPRTAVKKQTLTDFLPKSPQPDVK*NPEEEQA 187
L++ L + + SGRL+ W +EL E ++ + PRTA+K Q L DF+ V+ + EEE+
Sbjct: 140 LEKALQKLDTSGRLLRWAVELSEFEVEYKPRTAIKAQALADFI-------VEASYEEEEE 192
Query: 188 QEAKQSRLCEEDWWMLFIDEASGIEKAGLLVIVIDPVGAEVTYTLWF 328
W L +D ++ +G +I+ P G Y + F
Sbjct: 193 PVGV---------WKLAVDGSAAQTGSGAGIIMTSPEGNVFEYAIKF 230
>gb|AAD20433.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 889
Score = 97.4 bits (241), Expect(2) = 9e-28
Identities = 47/111 (42%), Positives = 73/111 (65%)
Frame = +1
Query: 331 FSASNNEAEYEAFIVGIQISHKLGKKKLQAYDDSQLVANQVNGSYEAKDTVMRKYLDNVH 510
F+ASNNE+EYEA I GI+++ + G +++ AY DSQLV +Q +G YEAKD M YL+ V
Sbjct: 678 FNASNNESEYEALIAGIKLAQEKGIREIHAYSDSQLVTSQFHGEYEAKDERMEAYLELVK 737
Query: 511 SLFSLFEEFRMNRVPHSQNSKTDALSKLAFSAYTHLTKSVLVEVLSQRSIE 663
+L FE F++ R+P +N+ D L+ LA ++ + + + VE + SI+
Sbjct: 738 TLAQQFESFKLTRIPRGENTSADTLAALASTSDPFVKRIIPVEGIEHTSID 788
Score = 52.4 bits (124), Expect(2) = 9e-28
Identities = 32/107 (29%), Positives = 52/107 (48%)
Frame = +2
Query: 2 QLLKQILLRPEASGRLVNWVIELGEHDITFFPRTAVKKQTLTDFLPKSPQPDVK*NPEEE 181
Q ++ IL SGRL W IEL E+DI + RT++K Q L DF+ K P D+ +
Sbjct: 582 QPIRTILHSLTQSGRLAKWAIELREYDIEYRTRTSLKAQVLADFVIKLPLADLDGTNSNK 641
Query: 182 QAQEAKQSRLCEEDWWMLFIDEASGIEKAGLLVIVIDPVGAEVTYTL 322
+ W+L +D +S + +G+ + + P G + +L
Sbjct: 642 K--------------WLLHVDGSSNRQGSGVGIQLTSPTGEVIEQSL 674
>gb|AFU25705.1| gag-pol precursor [Castanea mollissima]
Length = 1106
Score = 91.7 bits (226), Expect(2) = 9e-27
Identities = 45/110 (40%), Positives = 71/110 (64%)
Frame = +1
Query: 331 FSASNNEAEYEAFIVGIQISHKLGKKKLQAYDDSQLVANQVNGSYEAKDTVMRKYLDNVH 510
F A+NNEAEYEA + G Q+ LG + ++ Y DS+LV Q+NG +E +D M+KYL+ V
Sbjct: 569 FIATNNEAEYEALLAGAQMVRHLGGEVVELYCDSRLVFGQINGEFEVRDERMKKYLERVK 628
Query: 511 SLFSLFEEFRMNRVPHSQNSKTDALSKLAFSAYTHLTKSVLVEVLSQRSI 660
+ LF+ F++ ++P QN+ D L+ LA S + L ++V+V+ L S+
Sbjct: 629 GVLRLFKSFQVRQIPRGQNAHADLLAMLATSLGSKLPQTVMVKDLLTSSL 678
Score = 54.7 bits (130), Expect(2) = 9e-27
Identities = 30/96 (31%), Positives = 51/96 (53%)
Frame = +2
Query: 8 LKQILLRPEASGRLVNWVIELGEHDITFFPRTAVKKQTLTDFLPKSPQPDVK*NPEEEQA 187
L+ I+ + + +GR+ W +LG +D+ + PRTA+K Q L DF+ + + D K +E+
Sbjct: 464 LQAIMRKLDYTGRVAKWGTKLGAYDVKYMPRTAIKGQDLVDFVAEFTESDTK---QEDAM 520
Query: 188 QEAKQSRLCEEDWWMLFIDEASGIEKAGLLVIVIDP 295
L W + D AS + AG+ V++I P
Sbjct: 521 MTVMTIGLGNVPLWEVCTDGASNRKGAGIGVVLITP 556
>gb|AAY99339.1| pol-polyprotein [Silene latifolia]
Length = 1307
Score = 92.4 bits (228), Expect(2) = 2e-26
Identities = 44/110 (40%), Positives = 73/110 (66%)
Frame = +1
Query: 331 FSASNNEAEYEAFIVGIQISHKLGKKKLQAYDDSQLVANQVNGSYEAKDTVMRKYLDNVH 510
FSASNNE+EYEA I G++++ G + + DS LV NQ+ G YEA+D M +YL+ V
Sbjct: 772 FSASNNESEYEAVITGVELARAAGAEHIVLKTDSLLVTNQIRGEYEARDDGMVRYLERVK 831
Query: 511 SLFSLFEEFRMNRVPHSQNSKTDALSKLAFSAYTHLTKSVLVEVLSQRSI 660
+ + + F++ +P S+N++ D LSKL S +++++VLV++ + +SI
Sbjct: 832 ADTAKLKSFQIQCIPRSENNRADTLSKLTSSTIKNVSRTVLVDIRNAKSI 881
Score = 52.8 bits (125), Expect(2) = 2e-26
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 5/116 (4%)
Frame = +2
Query: 2 QLLKQILLRPEASGRLVNWVIELGEHDITFFPRTAVKKQTLTDFL-----PKSPQPDVK* 166
Q L++ L E SGRL+ W +EL I + PR ++K Q L DFL + P P V
Sbjct: 679 QPLEKALENFEKSGRLIKWAVELSGFGIQYKPRPSIKGQALADFLAECTYQEEPNPGV-- 736
Query: 167 NPEEEQAQEAKQSRLCEEDWWMLFIDEASGIEKAGLLVIVIDPVGAEVTYTLWFIF 334
W ++ D +S +G +++I P G E Y L F F
Sbjct: 737 --------------------WEVYTDGSSTTNSSGAGILIISPNGDEFEYALKFTF 772