BLASTX nr result

ID: Cephaelis21_contig00043274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00043274
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513133.1| DNA repair helicase rad5,16, putative [Ricin...    47   5e-09
ref|XP_004150194.1| PREDICTED: uncharacterized ATP-dependent hel...    47   7e-09
ref|XP_004164769.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio...    47   7e-09
ref|XP_002310362.1| chromatin remodeling complex subunit [Populu...    47   9e-09
gb|EEC83002.1| hypothetical protein OsI_28047 [Oryza sativa Indi...    50   1e-08

>ref|XP_002513133.1| DNA repair helicase rad5,16, putative [Ricinus communis]
           gi|223548144|gb|EEF49636.1| DNA repair helicase rad5,16,
           putative [Ricinus communis]
          Length = 993

 Score = 47.4 bits (111), Expect(2) = 5e-09
 Identities = 22/32 (68%), Positives = 27/32 (84%), Gaps = 1/32 (3%)
 Frame = +2

Query: 2   KIALAWLIEKEKGGV-CVGGFLADDQGLGKTV 94
           KIALAW+++KE   + C+GG LADDQGLGKTV
Sbjct: 268 KIALAWMLQKETRSLHCLGGILADDQGLGKTV 299



 Score = 37.7 bits (86), Expect(2) = 5e-09
 Identities = 19/36 (52%), Positives = 26/36 (72%)
 Frame = +1

Query: 97  SMIALIQMERLSQDRHKSEAASTIKPVALNLEDDED 204
           SMIALIQM++  Q + KSE  +  K  ALNL+DD++
Sbjct: 300 SMIALIQMQKFLQLKSKSEDQANKKSEALNLDDDDE 335


>ref|XP_004150194.1| PREDICTED: uncharacterized ATP-dependent helicase C23E6.02-like
           [Cucumis sativus]
          Length = 1015

 Score = 46.6 bits (109), Expect(2) = 7e-09
 Identities = 21/32 (65%), Positives = 27/32 (84%), Gaps = 1/32 (3%)
 Frame = +2

Query: 2   KIALAWLIEKEKGGV-CVGGFLADDQGLGKTV 94
           KIAL+W+++KE   + C+GG LADDQGLGKTV
Sbjct: 258 KIALSWMLQKENKSLHCLGGILADDQGLGKTV 289



 Score = 38.1 bits (87), Expect(2) = 7e-09
 Identities = 18/36 (50%), Positives = 26/36 (72%)
 Frame = +1

Query: 97  SMIALIQMERLSQDRHKSEAASTIKPVALNLEDDED 204
           SMI+LIQ+++ +Q + K E  S  K  ALNL+DD+D
Sbjct: 290 SMISLIQLQKSNQSKAKLEDGSKTKAEALNLDDDDD 325


>ref|XP_004164769.1| PREDICTED: LOW QUALITY PROTEIN: transcription termination factor
           2-like, partial [Cucumis sativus]
          Length = 411

 Score = 46.6 bits (109), Expect(2) = 7e-09
 Identities = 21/32 (65%), Positives = 27/32 (84%), Gaps = 1/32 (3%)
 Frame = +2

Query: 2   KIALAWLIEKEKGGV-CVGGFLADDQGLGKTV 94
           KIAL+W+++KE   + C+GG LADDQGLGKTV
Sbjct: 36  KIALSWMLQKENKSLHCLGGILADDQGLGKTV 67



 Score = 38.1 bits (87), Expect(2) = 7e-09
 Identities = 18/36 (50%), Positives = 26/36 (72%)
 Frame = +1

Query: 97  SMIALIQMERLSQDRHKSEAASTIKPVALNLEDDED 204
           SMI+LIQ+++ +Q + K E  S  K  ALNL+DD+D
Sbjct: 68  SMISLIQLQKSNQSKAKLEDGSKTKAEALNLDDDDD 103


>ref|XP_002310362.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222853265|gb|EEE90812.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 923

 Score = 47.0 bits (110), Expect(2) = 9e-09
 Identities = 21/32 (65%), Positives = 27/32 (84%), Gaps = 1/32 (3%)
 Frame = +2

Query: 2   KIALAWLIEKEKGGV-CVGGFLADDQGLGKTV 94
           KIALAW+++KE   + C+GG LADDQGLGKT+
Sbjct: 205 KIALAWMLQKETRSLHCLGGILADDQGLGKTI 236



 Score = 37.4 bits (85), Expect(2) = 9e-09
 Identities = 18/36 (50%), Positives = 25/36 (69%)
 Frame = +1

Query: 97  SMIALIQMERLSQDRHKSEAASTIKPVALNLEDDED 204
           SMIAL+QM++  + + KSE     K  ALNL+DD+D
Sbjct: 237 SMIALVQMQKSLETKSKSEDQRNHKTEALNLDDDDD 272


>gb|EEC83002.1| hypothetical protein OsI_28047 [Oryza sativa Indica Group]
          Length = 1235

 Score = 49.7 bits (117), Expect(2) = 1e-08
 Identities = 21/31 (67%), Positives = 24/31 (77%)
 Frame = +2

Query: 2   KIALAWLIEKEKGGVCVGGFLADDQGLGKTV 94
           K+ALAW++ KE    C GG LADDQGLGKTV
Sbjct: 490 KMALAWMVSKENSSHCAGGILADDQGLGKTV 520



 Score = 34.3 bits (77), Expect(2) = 1e-08
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = +1

Query: 97  SMIALIQMERLSQDRHKSEAASTIKPVALNLEDDED 204
           S IALIQ +R+ Q +  S  +  +K  ALNL+DD++
Sbjct: 521 STIALIQKQRIQQSKFMSVDSDRLKAEALNLDDDDE 556