BLASTX nr result

ID: Cephaelis21_contig00043094 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00043094
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-a...   210   8e-53
ref|XP_002308876.1| chromatin remodeling complex subunit [Populu...   202   3e-50
ref|XP_002517285.1| helicase, putative [Ricinus communis] gi|223...   192   2e-47
ref|NP_196132.2| DNA/RNA helicase [Arabidopsis thaliana] gi|2026...   180   1e-43
sp|Q9FF61.1|SM3L1_ARATH RecName: Full=Putative SWI/SNF-related m...   180   1e-43

>ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 1-like
            [Vitis vinifera]
          Length = 874

 Score =  210 bits (535), Expect = 8e-53
 Identities = 104/135 (77%), Positives = 121/135 (89%)
 Frame = -1

Query: 405  LEGPLKAAGFKILRLDGSMNAQKRAKVIKEFEVPAPDGATVLLASLKACGAGINLTAASM 226
            LE PLKAAGFK LRLDGSMNA++RA+VI+EF  P P+G TVLLASLKA GAGINLTAAS 
Sbjct: 734  LEQPLKAAGFKTLRLDGSMNAKRRAQVIEEFGAPGPNGPTVLLASLKASGAGINLTAASR 793

Query: 225  VYLVEPWWNPAIEEQAMDRVHRIGQKEHVKIVKIIARNTVEERILELQEHKRLLARKAFG 46
            VYL+EPWWNPA+EEQAMDRVHRIGQKE VKIV++IARN++EERILELQE K+ LA++AFG
Sbjct: 794  VYLLEPWWNPAVEEQAMDRVHRIGQKEDVKIVRLIARNSIEERILELQERKKKLAKEAFG 853

Query: 45   RRGPQDQREISREDL 1
            RRG +D+RE+  EDL
Sbjct: 854  RRGLKDRREVGVEDL 868


>ref|XP_002308876.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222854852|gb|EEE92399.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 799

 Score =  202 bits (513), Expect = 3e-50
 Identities = 98/135 (72%), Positives = 118/135 (87%)
 Frame = -1

Query: 405  LEGPLKAAGFKILRLDGSMNAQKRAKVIKEFEVPAPDGATVLLASLKACGAGINLTAASM 226
            LE PLK AGFKILRLDGSMNA+KRA+VIK+F VP PDG TVLLASLKA GAGINL  AS 
Sbjct: 659  LEEPLKEAGFKILRLDGSMNAKKRAQVIKQFGVPGPDGPTVLLASLKASGAGINLAVASR 718

Query: 225  VYLVEPWWNPAIEEQAMDRVHRIGQKEHVKIVKIIARNTVEERILELQEHKRLLARKAFG 46
            VYL+EPWWNPA+EEQAMDRVHRIGQ+E V +V++IA++++EERILE+QE K+ LA++AFG
Sbjct: 719  VYLLEPWWNPAVEEQAMDRVHRIGQEEDVTVVRLIAQSSIEERILEMQERKKKLAKEAFG 778

Query: 45   RRGPQDQREISREDL 1
            RRG + QRE+  +DL
Sbjct: 779  RRGTKTQREVGIDDL 793


>ref|XP_002517285.1| helicase, putative [Ricinus communis] gi|223543548|gb|EEF45078.1|
           helicase, putative [Ricinus communis]
          Length = 363

 Score =  192 bits (489), Expect = 2e-47
 Identities = 95/135 (70%), Positives = 116/135 (85%)
 Frame = -1

Query: 405 LEGPLKAAGFKILRLDGSMNAQKRAKVIKEFEVPAPDGATVLLASLKACGAGINLTAASM 226
           LE PLKAAGFKILRLDG+MNA+K+A+VIKEF +P P+G TVLLASLKA  AGINL AAS 
Sbjct: 224 LEEPLKAAGFKILRLDGTMNAKKKAQVIKEFGIPGPNGPTVLLASLKASCAGINLAAASK 283

Query: 225 VYLVEPWWNPAIEEQAMDRVHRIGQKEHVKIVKIIARNTVEERILELQEHKRLLARKAFG 46
           VYL+EPWWNPA+EEQAMDRVHRIGQKE V +V++I RN++EERILE+QE K+ LA++AFG
Sbjct: 284 VYLLEPWWNPAVEEQAMDRVHRIGQKEDVTVVRLITRNSIEERILEMQERKKKLAKEAFG 343

Query: 45  RRGPQDQREISREDL 1
           RRG +   ++  +DL
Sbjct: 344 RRGAK-AHDVRTDDL 357


>ref|NP_196132.2| DNA/RNA helicase [Arabidopsis thaliana] gi|20260624|gb|AAM13210.1|
            helicase-like transcription factor-like protein
            [Arabidopsis thaliana] gi|31711770|gb|AAP68241.1|
            At5g05130 [Arabidopsis thaliana]
            gi|332003449|gb|AED90832.1| DNA/RNA helicase [Arabidopsis
            thaliana]
          Length = 862

 Score =  180 bits (456), Expect = 1e-43
 Identities = 88/135 (65%), Positives = 110/135 (81%)
 Frame = -1

Query: 405  LEGPLKAAGFKILRLDGSMNAQKRAKVIKEFEVPAPDGATVLLASLKACGAGINLTAASM 226
            LE PLKAAGF ILRLDG+M  +KR +VI EF  P   G  VLLASLKA G GINLTAAS 
Sbjct: 722  LETPLKAAGFTILRLDGAMTVKKRTQVIGEFGNPELTGPVVLLASLKASGTGINLTAASR 781

Query: 225  VYLVEPWWNPAIEEQAMDRVHRIGQKEHVKIVKIIARNTVEERILELQEHKRLLARKAFG 46
            VYL +PWWNPA+EEQAMDR+HRIGQK+ VK++++IARN++EER+LELQ+ K+ LA +AF 
Sbjct: 782  VYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIARNSIEERVLELQQKKKNLANEAFK 841

Query: 45   RRGPQDQREISREDL 1
            RR  +D+RE++ ED+
Sbjct: 842  RRQKKDEREVNVEDV 856


>sp|Q9FF61.1|SM3L1_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin subfamily A member
            3-like 1; Short=SMARCA3-like protein 1
            gi|10178052|dbj|BAB11535.1| helicase-like transcription
            factor-like protein [Arabidopsis thaliana]
          Length = 881

 Score =  180 bits (456), Expect = 1e-43
 Identities = 88/135 (65%), Positives = 110/135 (81%)
 Frame = -1

Query: 405  LEGPLKAAGFKILRLDGSMNAQKRAKVIKEFEVPAPDGATVLLASLKACGAGINLTAASM 226
            LE PLKAAGF ILRLDG+M  +KR +VI EF  P   G  VLLASLKA G GINLTAAS 
Sbjct: 741  LETPLKAAGFTILRLDGAMTVKKRTQVIGEFGNPELTGPVVLLASLKASGTGINLTAASR 800

Query: 225  VYLVEPWWNPAIEEQAMDRVHRIGQKEHVKIVKIIARNTVEERILELQEHKRLLARKAFG 46
            VYL +PWWNPA+EEQAMDR+HRIGQK+ VK++++IARN++EER+LELQ+ K+ LA +AF 
Sbjct: 801  VYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIARNSIEERVLELQQKKKNLANEAFK 860

Query: 45   RRGPQDQREISREDL 1
            RR  +D+RE++ ED+
Sbjct: 861  RRQKKDEREVNVEDV 875


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