BLASTX nr result

ID: Cephaelis21_contig00043057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00043057
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312117.1| predicted protein [Populus trichocarpa] gi|1...    45   1e-10
ref|XP_002282278.1| PREDICTED: eukaryotic translation initiation...    46   6e-10
ref|XP_003632667.1| PREDICTED: eukaryotic translation initiation...    46   1e-09
emb|CAN73378.1| hypothetical protein VITISV_037535 [Vitis vinifera]    46   1e-09
ref|XP_002272361.1| PREDICTED: eukaryotic translation initiation...    46   1e-09

>ref|XP_002312117.1| predicted protein [Populus trichocarpa] gi|118480981|gb|ABK92444.1|
           unknown [Populus trichocarpa]
           gi|222851937|gb|EEE89484.1| predicted protein [Populus
           trichocarpa]
          Length = 293

 Score = 45.4 bits (106), Expect(3) = 1e-10
 Identities = 24/36 (66%), Positives = 27/36 (75%), Gaps = 2/36 (5%)
 Frame = +3

Query: 3   KKFIEYKSNDMGNKVKIATTT--RKLANTHLSKRSM 104
           KK IEYK ND GNK+KI TTT  RKLA   LSKR++
Sbjct: 43  KKVIEYKFNDDGNKIKITTTTRVRKLAKARLSKRAV 78



 Score = 40.4 bits (93), Expect(3) = 1e-10
 Identities = 16/17 (94%), Positives = 17/17 (100%)
 Frame = +1

Query: 103 WPKFGDAVHEDVGTRLT 153
           WPKFGDAVHEDVG+RLT
Sbjct: 83  WPKFGDAVHEDVGSRLT 99



 Score = 24.6 bits (52), Expect(3) = 1e-10
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = +2

Query: 164 EILLERPRAPDFK 202
           EILLERPRAP  K
Sbjct: 105 EILLERPRAPGTK 117


>ref|XP_002282278.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G-B
           [Vitis vinifera]
          Length = 296

 Score = 45.8 bits (107), Expect(3) = 6e-10
 Identities = 25/36 (69%), Positives = 27/36 (75%), Gaps = 2/36 (5%)
 Frame = +3

Query: 3   KKFIEYKSNDMGNKVKIATTT--RKLANTHLSKRSM 104
           KK IEYK ND GNKVKI TTT  RKLA   LSKR++
Sbjct: 47  KKVIEYKFNDDGNKVKITTTTRIRKLAKARLSKRAI 82



 Score = 37.4 bits (85), Expect(3) = 6e-10
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = +1

Query: 103 WPKFGDAVHEDVGTRLT 153
           W KFGDAVHEDVG+RLT
Sbjct: 87  WAKFGDAVHEDVGSRLT 103



 Score = 24.6 bits (52), Expect(3) = 6e-10
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = +2

Query: 164 EILLERPRAPDFK 202
           EILLERPRAP  K
Sbjct: 109 EILLERPRAPGSK 121


>ref|XP_003632667.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G
           isoform 2 [Vitis vinifera]
          Length = 286

 Score = 46.2 bits (108), Expect(2) = 1e-09
 Identities = 25/36 (69%), Positives = 28/36 (77%), Gaps = 2/36 (5%)
 Frame = +3

Query: 3   KKFIEYKSNDMGNKVKIATTT--RKLANTHLSKRSM 104
           KK IEYK ND G+KVKI TTT  RKLAN  LSKR++
Sbjct: 43  KKVIEYKFNDDGDKVKITTTTRVRKLANARLSKRAV 78



 Score = 41.2 bits (95), Expect(2) = 1e-09
 Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 12/61 (19%)
 Frame = +1

Query: 103 WPKFGDAVHEDVGTRLTY-----FLRDPPRTSQS---PRFQKIF*GGKILIV----AKEG 246
           WPKFGDA+HEDVG+RLT       L + PR   S       ++  GG +L+V     K+G
Sbjct: 83  WPKFGDAIHEDVGSRLTMVSTEEILIERPRAHGSILRDSLAQLTKGGAVLMVCRTCGKKG 142

Query: 247 D 249
           D
Sbjct: 143 D 143


>emb|CAN73378.1| hypothetical protein VITISV_037535 [Vitis vinifera]
          Length = 306

 Score = 46.2 bits (108), Expect(3) = 1e-09
 Identities = 25/36 (69%), Positives = 28/36 (77%), Gaps = 2/36 (5%)
 Frame = +3

Query: 3   KKFIEYKSNDMGNKVKIATTT--RKLANTHLSKRSM 104
           KK IEYK ND G+KVKI TTT  RKLAN  LSKR++
Sbjct: 43  KKVIEYKFNDDGDKVKITTTTRVRKLANARLSKRAV 78



 Score = 40.0 bits (92), Expect(3) = 1e-09
 Identities = 15/17 (88%), Positives = 17/17 (100%)
 Frame = +1

Query: 103 WPKFGDAVHEDVGTRLT 153
           WPKFGDA+HEDVG+RLT
Sbjct: 83  WPKFGDAIHEDVGSRLT 99



 Score = 20.4 bits (41), Expect(3) = 1e-09
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +2

Query: 164 EILLERPRA 190
           EIL+ERPRA
Sbjct: 105 EILIERPRA 113


>ref|XP_002272361.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G
           isoform 1 [Vitis vinifera]
          Length = 293

 Score = 46.2 bits (108), Expect(3) = 1e-09
 Identities = 25/36 (69%), Positives = 28/36 (77%), Gaps = 2/36 (5%)
 Frame = +3

Query: 3   KKFIEYKSNDMGNKVKIATTT--RKLANTHLSKRSM 104
           KK IEYK ND G+KVKI TTT  RKLAN  LSKR++
Sbjct: 43  KKVIEYKFNDDGDKVKITTTTRVRKLANARLSKRAV 78



 Score = 40.0 bits (92), Expect(3) = 1e-09
 Identities = 15/17 (88%), Positives = 17/17 (100%)
 Frame = +1

Query: 103 WPKFGDAVHEDVGTRLT 153
           WPKFGDA+HEDVG+RLT
Sbjct: 83  WPKFGDAIHEDVGSRLT 99



 Score = 20.4 bits (41), Expect(3) = 1e-09
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +2

Query: 164 EILLERPRA 190
           EIL+ERPRA
Sbjct: 105 EILIERPRA 113


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