BLASTX nr result

ID: Cephaelis21_contig00043038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00043038
         (1038 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34321.1| RNase H family protein [Solanum demissum]               96   5e-27
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ...   120   2e-26
gb|AAP54617.2| retrotransposon protein, putative, unclassified [...   120   2e-26
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...   124   3e-26
ref|XP_003526344.1| PREDICTED: uncharacterized protein LOC100799...   112   4e-26

>gb|ABI34321.1| RNase H family protein [Solanum demissum]
          Length = 945

 Score = 95.9 bits (237), Expect(2) = 5e-27
 Identities = 48/133 (36%), Positives = 69/133 (51%), Gaps = 3/133 (2%)
 Frame = +2

Query: 353 HPVLVQKQQTDSHTWTRMLTARNFMEKEIYWDINRGEVSMLWDSWTSFGKMGNMF---AN 523
           HPV   K    SHTW++ML  R+ +E  I W I  G VSM WD+W   G + N+    ++
Sbjct: 433 HPVAKAKSSKQSHTWSKMLKIRHSVENNILWIIYAGNVSMWWDNWMGNGALSNILPPPSH 492

Query: 524 MEDQNLCNLIRGESWDQEAIRSIFPEDIAQQIFLVPICAKSAENDRMIWKPSSNGTFSSA 703
               N+ + I    WD + +  I P  +  QI  +PI     ++D  IW PS NG F++ 
Sbjct: 493 YNKDNVKDFIHKREWDFDKLSDILPPQVVNQIVSIPI-GDPNQSDYAIWIPSENGHFTTK 551

Query: 704 SAYNSIKKSRQKN 742
           SAY     +R+KN
Sbjct: 552 SAYVDCSNTREKN 564



 Score = 52.4 bits (124), Expect(2) = 5e-27
 Identities = 27/80 (33%), Positives = 38/80 (47%)
 Frame = +3

Query: 735 KKTHINESVWKK*TPAKVSFFLSNLFRLKLPIDSVLYKFGINGPSRCHCCSQPDIESFQH 914
           +K  +   +W    P K+SF    L + KLP    + KF  N  S C CC     E+  H
Sbjct: 562 EKNDMRNKIWHGKFPFKMSFLTWRLVQNKLPFYDTVGKFVDNIDSNCVCCKNMKTETINH 621

Query: 915 VFSSGQLAKEVWKQFEFPLG 974
           VF +  +A  +WK+F   LG
Sbjct: 622 VFLNSDVASYLWKKFGGTLG 641


>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
            Japonica Group]
          Length = 1382

 Score =  120 bits (301), Expect(2) = 2e-26
 Identities = 73/246 (29%), Positives = 125/246 (50%), Gaps = 8/246 (3%)
 Frame = +2

Query: 2    INGWSNKWLSTGGRIVLLKSVLYSIPIHLLSVLQPPKSVIYTLESMFSDFLWGFSEYGKK 181
            +NGW+++ LS  G   +LK+V  +IP +++S  + P S+   +++  +D  WGF +  KK
Sbjct: 791  VNGWTDRPLSRAGMETMLKAVAQAIPNYVMSCFRIPVSICEKMKTCIADHWWGFEDGKKK 850

Query: 182  *HWRKWEDVCYPVEEGALGFRSIETLVQAFGGKLWWR-LRERNYLWASFMWNKYVGNSHP 358
             HW+ W  +  P   G +GFR   T  QA  G+  WR L + + L +  +  +Y  NS  
Sbjct: 851  MHWKSWSWLSTPKFLGGMGFREFTTFNQAMLGRQCWRLLTDPDSLCSRVLKGRYFPNSSF 910

Query: 359  VLVQKQQTDSHTWTRMLTARNFMEKEIYWDINRGE-VSMLWDSWTSFGKMGNMFANME-- 529
                + ++ S TW  +L  R  + K + W +  G+ + +  D+W   G    +   +   
Sbjct: 911  WEAAQPKSPSFTWRSLLFGRELLAKGVRWGVGDGKTIKIFSDNWIP-GFRPQLVTTLSPF 969

Query: 530  --DQNLCNLIRGES--WDQEAIRSIFPEDIAQQIFLVPICAKSAENDRMIWKPSSNGTFS 697
              D  +  L+  ++  WD + IRS+FP DIA++I  +PI ++  + D   W     G +S
Sbjct: 970  PTDATVSCLMNEDARCWDGDLIRSLFPVDIAKEILQIPI-SRHGDADFASWPHDKLGLYS 1028

Query: 698  SASAYN 715
              SAYN
Sbjct: 1029 VRSAYN 1034



 Score = 25.4 bits (54), Expect(2) = 2e-26
 Identities = 18/81 (22%), Positives = 32/81 (39%)
 Frame = +3

Query: 753  ESVWKK*TPAKVSFFLSNLFRLKLPIDSVLYKFGINGPSRCHCCSQPDIESFQHVFSSGQ 932
            + +WK   P K+   L       L     L +  I     C  C++ D  + +HVF    
Sbjct: 1064 KGLWKINAPGKMKITLWRAAHECLATGFQLRRRHIPSTDGCVFCNRDD--TVEHVFLFCP 1121

Query: 933  LAKEVWKQFEFPLGYGMMNNG 995
             A ++W++ +      +  NG
Sbjct: 1122 FAAQIWEEIKGKCAVKLGRNG 1142


>gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical
            protein OsJ_32156 [Oryza sativa Japonica Group]
          Length = 1339

 Score =  120 bits (301), Expect(2) = 2e-26
 Identities = 73/246 (29%), Positives = 125/246 (50%), Gaps = 8/246 (3%)
 Frame = +2

Query: 2    INGWSNKWLSTGGRIVLLKSVLYSIPIHLLSVLQPPKSVIYTLESMFSDFLWGFSEYGKK 181
            +NGW+++ LS  G   +LK+V  +IP +++S  + P S+   +++  +D  WGF +  KK
Sbjct: 748  VNGWTDRPLSRAGMETMLKAVAQAIPNYVMSCFRIPVSICEKMKTCIADHWWGFEDGKKK 807

Query: 182  *HWRKWEDVCYPVEEGALGFRSIETLVQAFGGKLWWR-LRERNYLWASFMWNKYVGNSHP 358
             HW+ W  +  P   G +GFR   T  QA  G+  WR L + + L +  +  +Y  NS  
Sbjct: 808  MHWKSWSWLSTPKFLGGMGFREFTTFNQAMLGRQCWRLLTDPDSLCSRVLKGRYFPNSSF 867

Query: 359  VLVQKQQTDSHTWTRMLTARNFMEKEIYWDINRGE-VSMLWDSWTSFGKMGNMFANME-- 529
                + ++ S TW  +L  R  + K + W +  G+ + +  D+W   G    +   +   
Sbjct: 868  WEAAQPKSPSFTWRSLLFGRELLAKGVRWGVGDGKTIKIFSDNWIP-GFRPQLVTTLSPF 926

Query: 530  --DQNLCNLIRGES--WDQEAIRSIFPEDIAQQIFLVPICAKSAENDRMIWKPSSNGTFS 697
              D  +  L+  ++  WD + IRS+FP DIA++I  +PI ++  + D   W     G +S
Sbjct: 927  PTDATVSCLMNEDARCWDGDLIRSLFPVDIAKEILQIPI-SRHGDADFASWPHDKLGLYS 985

Query: 698  SASAYN 715
              SAYN
Sbjct: 986  VRSAYN 991



 Score = 25.4 bits (54), Expect(2) = 2e-26
 Identities = 18/81 (22%), Positives = 32/81 (39%)
 Frame = +3

Query: 753  ESVWKK*TPAKVSFFLSNLFRLKLPIDSVLYKFGINGPSRCHCCSQPDIESFQHVFSSGQ 932
            + +WK   P K+   L       L     L +  I     C  C++ D  + +HVF    
Sbjct: 1021 KGLWKINAPGKMKITLWRAAHECLATGFQLRRRHIPSTDGCVFCNRDD--TVEHVFLFCP 1078

Query: 933  LAKEVWKQFEFPLGYGMMNNG 995
             A ++W++ +      +  NG
Sbjct: 1079 FAAQIWEEIKGKCAVKLGRNG 1099


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score =  124 bits (312), Expect = 3e-26
 Identities = 72/246 (29%), Positives = 124/246 (50%), Gaps = 9/246 (3%)
 Frame = +2

Query: 2    INGWSNKWLSTGGRIVLLKSVLYSIPIHLLSVLQPPKSVIYTLESMFSDFLWGFSEYGKK 181
            + GW  K LS  G+ VL+KSV  +IP +++SV   P  +I  + S+ + F WG S+  +K
Sbjct: 779  LQGWKEKLLSRPGKEVLIKSVAQAIPTYMMSVFSLPSGLIDEIHSLLARFWWGSSDTNRK 838

Query: 182  *HWRKWEDVCYPVEEGALGFRSIETLVQAFGGKLWWRLRERNY-LWASFMWNKYVGNSHP 358
             HW  W+ +CYP   G LGFR +    Q+   K  WRL   +  L    +  +Y  +S  
Sbjct: 839  MHWHSWDTLCYPKSMGGLGFRDLHCFNQSLLAKQAWRLCTGDQTLLYRLLQARYFKSSEL 898

Query: 359  VLVQKQQTDSHTWTRMLTARNFMEKEIYWDINRGEVSMLWDSWTSFGKMGNMFANME--- 529
            +  ++    S TW  +  +++ + + + W +  GE   +W+     G+  +M    +   
Sbjct: 899  LEARRGYNPSFTWRSIWGSKSLLLEGLKWCVGSGERIRVWEDAWILGEGAHMVPTPQADS 958

Query: 530  --DQNLCNLI---RGESWDQEAIRSIFPEDIAQQIFLVPICAKSAENDRMIWKPSSNGTF 694
              D  +C+LI   RG +W+ E+++  F E+  + +  +P+ ++   +D   W PS NG F
Sbjct: 959  NLDLKVCDLIDVARG-AWNIESVQQTFVEEEWELVLSIPL-SRFLPDDHRYWWPSRNGIF 1016

Query: 695  SSASAY 712
            S  S Y
Sbjct: 1017 SVRSCY 1022


>ref|XP_003526344.1| PREDICTED: uncharacterized protein LOC100799415 [Glycine max]
          Length = 3081

 Score =  112 bits (281), Expect(2) = 4e-26
 Identities = 80/261 (30%), Positives = 115/261 (44%), Gaps = 23/261 (8%)
 Frame = +2

Query: 11   WSNKWLSTGGRIVLLKSVLYSIPIHLLSVLQPPKSVIYTLESMFSDFLWGFSEYGKK*HW 190
            W  + LS GGR+ L++S L SIPI+ LS  + P  V   L  +   FLWG     KK  W
Sbjct: 2157 WKQRHLSFGGRVTLIQSTLSSIPIYFLSFFKLPAKVADKLIGIQRRFLWGGGSEQKKIAW 2216

Query: 191  RKWEDVCYPVEEGALGFRSIETLVQAFGGKLWWRL-RERNYLWASFMWNKYVGNSHPVLV 367
             KWE VC   + G LG + I T  +A  GK  W L  +   LWA  + +KY G    V  
Sbjct: 2217 VKWETVCLSKQNGGLGIKDIRTFNKALLGKWRWDLFHQHKELWARILASKYGGWRSLVDA 2276

Query: 368  QKQQTDSHTWTRMLTA------RNFMEKEIYWDINRGEVSMLW-DSWTSFG-----KMGN 511
            ++   +S  W  +L         N + +   W +  G+   LW D WT  G     K   
Sbjct: 2277 KRVSNESVWWQDLLAVTHDQQFNNILNEGTMWRVGCGDKIRLWEDRWTGSGQPLMLKYPR 2336

Query: 512  MFANMEDQNLCNLIRG----ESWDQEAI--RSIFPEDIAQQIFLVP----ICAKSAENDR 661
            ++     Q    L  G     +W+   +  R +F  ++A  +  +     I  +  E D 
Sbjct: 2337 LYQISSQQQKLILQMGTFIQSAWEWNLLWRRPLFDNEVASAVGFLEDISHITLQQHEADS 2396

Query: 662  MIWKPSSNGTFSSASAYNSIK 724
              WK  SNG +SS SAY  ++
Sbjct: 2397 WTWKHESNGYYSSRSAYRLLQ 2417



 Score = 32.3 bits (72), Expect(2) = 4e-26
 Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
 Frame = +3

Query: 705  QHITQSKSLDKKTHINESVWKK*TPAKVSFFLSNLFRLKLPIDSVLYKFGIN-GPSRCHC 881
            Q I+   S+D    I + +WK   P K + F   L R +LP  S L +  I+   S C  
Sbjct: 2417 QGISDVASMDD---IFKDLWKLKIPTKATIFAWRLIRDRLPTKSNLRRRQIDISDSLCPF 2473

Query: 882  CSQPDIESFQHVFSSGQLAKEVWKQFEFPLG 974
            CS  D E+  H+F      + +W + +  +G
Sbjct: 2474 CSIKD-ETASHLFFECSKIQHLWWESQSWIG 2503


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