BLASTX nr result

ID: Cephaelis21_contig00042773 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00042773
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22269.3| unnamed protein product [Vitis vinifera]               97   1e-18
ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containi...    97   1e-18
ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containi...    95   8e-18
ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containi...    93   3e-17
ref|XP_002305377.1| predicted protein [Populus trichocarpa] gi|2...    91   2e-16

>emb|CBI22269.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 46/76 (60%), Positives = 58/76 (76%)
 Frame = +1

Query: 1   NGNLSMLSDIYAGARDWSSVASARLHMKNTCIEKPSGASSIELENEYHHFTMMDTRHSKS 180
           +GNLSMLS+IYA A DW + A+ RL MK+T I+KPSG SSIE+++E H FT+ D  H KS
Sbjct: 429 SGNLSMLSNIYAAAGDWDNFANIRLRMKSTSIQKPSGGSSIEVDDEVHEFTVFDRSHPKS 488

Query: 181 DLIYKVIDMLNQHMSK 228
           D IYK ID L QH++K
Sbjct: 489 DRIYKTIDGLGQHINK 504


>ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
           [Vitis vinifera]
          Length = 594

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 46/76 (60%), Positives = 58/76 (76%)
 Frame = +1

Query: 1   NGNLSMLSDIYAGARDWSSVASARLHMKNTCIEKPSGASSIELENEYHHFTMMDTRHSKS 180
           +GNLSMLS+IYA A DW + A+ RL MK+T I+KPSG SSIE+++E H FT+ D  H KS
Sbjct: 514 SGNLSMLSNIYAAAGDWDNFANIRLRMKSTSIQKPSGGSSIEVDDEVHEFTVFDRSHPKS 573

Query: 181 DLIYKVIDMLNQHMSK 228
           D IYK ID L QH++K
Sbjct: 574 DRIYKTIDGLGQHINK 589


>ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 604

 Score = 94.7 bits (234), Expect = 8e-18
 Identities = 48/81 (59%), Positives = 59/81 (72%)
 Frame = +1

Query: 4   GNLSMLSDIYAGARDWSSVASARLHMKNTCIEKPSGASSIELENEYHHFTMMDTRHSKSD 183
           GN S+LS+IYA A DW +VA+ RL MKNT  EKPSGASSIE+E E H FT+ D  H KSD
Sbjct: 521 GNYSLLSNIYAQAGDWMNVANVRLQMKNTGGEKPSGASSIEVEEEVHEFTVFDQSHPKSD 580

Query: 184 LIYKVIDMLNQHMSKTGGVPV 246
            IY++ID L Q + + G VP+
Sbjct: 581 DIYQMIDRLVQDLRQVGYVPM 601


>ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 604

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 47/81 (58%), Positives = 58/81 (71%)
 Frame = +1

Query: 4   GNLSMLSDIYAGARDWSSVASARLHMKNTCIEKPSGASSIELENEYHHFTMMDTRHSKSD 183
           GN S+LS+IYA A DW +VA+ RL M NT  +KPSGASSIE+E E H FT+ D  H KSD
Sbjct: 521 GNYSLLSNIYAQAGDWMNVANVRLQMMNTGGQKPSGASSIEVEEEVHEFTVFDQSHPKSD 580

Query: 184 LIYKVIDMLNQHMSKTGGVPV 246
            IYK+ID L Q + + G VP+
Sbjct: 581 DIYKMIDRLVQDLRQVGYVPM 601


>ref|XP_002305377.1| predicted protein [Populus trichocarpa] gi|222848341|gb|EEE85888.1|
           predicted protein [Populus trichocarpa]
          Length = 427

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 44/83 (53%), Positives = 59/83 (71%)
 Frame = +1

Query: 4   GNLSMLSDIYAGARDWSSVASARLHMKNTCIEKPSGASSIELENEYHHFTMMDTRHSKSD 183
           GN S+LS+I+A A DWSSVA+ RL MKN  I+KPSGASSIE+++E H FT+ D  H KSD
Sbjct: 344 GNYSLLSNIFASAGDWSSVANVRLQMKNFGIQKPSGASSIEVDDEVHEFTVFDKSHPKSD 403

Query: 184 LIYKVIDMLNQHMSKTGGVPVTF 252
            IY++I+ L   + +   VP  +
Sbjct: 404 KIYQMINRLGLDLKRVHVVPKVY 426


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