BLASTX nr result

ID: Cephaelis21_contig00042532 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00042532
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containi...    89   3e-16
ref|XP_002513427.1| pentatricopeptide repeat-containing protein,...    89   5e-16
gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucu...    84   1e-14
ref|XP_004162287.1| PREDICTED: pentatricopeptide repeat-containi...    83   2e-14
ref|XP_004144640.1| PREDICTED: pentatricopeptide repeat-containi...    83   2e-14

>ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic [Vitis vinifera]
           gi|147852271|emb|CAN82234.1| hypothetical protein
           VITISV_038804 [Vitis vinifera]
          Length = 567

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 40/84 (47%), Positives = 58/84 (69%)
 Frame = +2

Query: 266 MAVQVNSVTPVQNSLSILSRNYCGFSKEVPKFQYFRLKKDFPVLLASREMAIAPKDGVFT 445
           MA+ VN+++P+ +     +R  CGF  +VP      L K F  +LAS ++ I+PKD VFT
Sbjct: 1   MAILVNAMSPITSPSPENARKVCGFFSQVPNLHTLSLNKGFSRVLASTQITISPKDNVFT 60

Query: 446 LPNWRSGNDDQRTKEIRMSDAFLY 517
           LPNWRSG +D RT+++R++DAFLY
Sbjct: 61  LPNWRSGKNDPRTRDLRLNDAFLY 84


>ref|XP_002513427.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547335|gb|EEF48830.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 567

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 41/84 (48%), Positives = 57/84 (67%)
 Frame = +2

Query: 266 MAVQVNSVTPVQNSLSILSRNYCGFSKEVPKFQYFRLKKDFPVLLASREMAIAPKDGVFT 445
           MA  V+SV+P+ N  +  +R  CGF   +P    F L KDF  +LAS ++ I+PKD V T
Sbjct: 1   MASLVHSVSPLTNPFTEAARIACGFFSHIPNLHSFSLNKDFTRVLASTQITISPKDSVIT 60

Query: 446 LPNWRSGNDDQRTKEIRMSDAFLY 517
           LPNWRSG +DQR +++R+SDAF +
Sbjct: 61  LPNWRSGKNDQRNRDMRISDAFFH 84


>gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 566

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 36/84 (42%), Positives = 57/84 (67%)
 Frame = +2

Query: 266 MAVQVNSVTPVQNSLSILSRNYCGFSKEVPKFQYFRLKKDFPVLLASREMAIAPKDGVFT 445
           MA  +N+V+P+ N+    +R  CGF   +P  Q   L K F  +LAS ++ I+PKD +FT
Sbjct: 1   MATLLNTVSPITNTSPETTRRGCGFFSHIPNLQKLSLNKGFSKVLASTQITISPKDTIFT 60

Query: 446 LPNWRSGNDDQRTKEIRMSDAFLY 517
           LPNW++G  +Q++KE+R++DAF +
Sbjct: 61  LPNWKTGKVEQKSKELRLTDAFFH 84


>ref|XP_004162287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic-like [Cucumis sativus]
          Length = 566

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 37/84 (44%), Positives = 55/84 (65%)
 Frame = +2

Query: 266 MAVQVNSVTPVQNSLSILSRNYCGFSKEVPKFQYFRLKKDFPVLLASREMAIAPKDGVFT 445
           MA  +N+V+P+ N     +R  CGF   +P  Q   L K F  +LAS ++ I+PKD +FT
Sbjct: 1   MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT 60

Query: 446 LPNWRSGNDDQRTKEIRMSDAFLY 517
           LPNW+ G  DQ++KE+R++DAF +
Sbjct: 61  LPNWKIGKLDQKSKELRLNDAFFH 84


>ref|XP_004144640.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic-like [Cucumis sativus]
          Length = 566

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 37/84 (44%), Positives = 55/84 (65%)
 Frame = +2

Query: 266 MAVQVNSVTPVQNSLSILSRNYCGFSKEVPKFQYFRLKKDFPVLLASREMAIAPKDGVFT 445
           MA  +N+V+P+ N     +R  CGF   +P  Q   L K F  +LAS ++ I+PKD +FT
Sbjct: 1   MATLLNTVSPITNPSPETTRRGCGFFSHIPNIQKLSLNKGFSKVLASTQITISPKDTIFT 60

Query: 446 LPNWRSGNDDQRTKEIRMSDAFLY 517
           LPNW+ G  DQ++KE+R++DAF +
Sbjct: 61  LPNWKIGKLDQKSKELRLNDAFFH 84


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