BLASTX nr result

ID: Cephaelis21_contig00042424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00042424
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310223.1| chromatin remodeling complex subunit [Populu...   158   5e-37
dbj|BAG30707.1| decrease in DNA methylation 1 [Brassica rapa]         156   1e-36
ref|XP_004165151.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   155   4e-36
ref|XP_004149166.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   155   4e-36
dbj|BAG30708.1| decrease in DNA methylation 1b [Brassica rapa]        155   4e-36

>ref|XP_002310223.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222853126|gb|EEE90673.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 754

 Score =  158 bits (399), Expect = 5e-37
 Identities = 73/80 (91%), Positives = 79/80 (98%)
 Frame = -1

Query: 270 LEERRRQIKEFNDENSTYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCH 91
           L+ER+RQI+EFNDENS YR+FLLSTRAGGLGINLT+ADTCILYDSDWNPQMDLQAMDRCH
Sbjct: 559 LDERKRQIEEFNDENSQYRVFLLSTRAGGLGINLTSADTCILYDSDWNPQMDLQAMDRCH 618

Query: 90  RIGQTKPVHVYRLATAQSVE 31
           RIGQTKPVHVYRLATAQS+E
Sbjct: 619 RIGQTKPVHVYRLATAQSIE 638


>dbj|BAG30707.1| decrease in DNA methylation 1 [Brassica rapa]
          Length = 767

 Score =  156 bits (395), Expect = 1e-36
 Identities = 75/80 (93%), Positives = 77/80 (96%)
 Frame = -1

Query: 270 LEERRRQIKEFNDENSTYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCH 91
           LEERRRQI+EFNDE S  RIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCH
Sbjct: 579 LEERRRQIQEFNDEKSNCRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCH 638

Query: 90  RIGQTKPVHVYRLATAQSVE 31
           RIGQTKPVHVYRLATAQS+E
Sbjct: 639 RIGQTKPVHVYRLATAQSIE 658


>ref|XP_004165151.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Cucumis sativus]
          Length = 828

 Score =  155 bits (391), Expect = 4e-36
 Identities = 72/80 (90%), Positives = 78/80 (97%)
 Frame = -1

Query: 270 LEERRRQIKEFNDENSTYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCH 91
           L+ER+RQI+EFND NS YRIF+LSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCH
Sbjct: 633 LDERKRQIQEFNDVNSNYRIFILSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCH 692

Query: 90  RIGQTKPVHVYRLATAQSVE 31
           RIGQ+KPVHVYRLATAQS+E
Sbjct: 693 RIGQSKPVHVYRLATAQSIE 712


>ref|XP_004149166.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Cucumis sativus]
          Length = 822

 Score =  155 bits (391), Expect = 4e-36
 Identities = 72/80 (90%), Positives = 78/80 (97%)
 Frame = -1

Query: 270 LEERRRQIKEFNDENSTYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCH 91
           L+ER+RQI+EFND NS YRIF+LSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCH
Sbjct: 627 LDERKRQIQEFNDVNSNYRIFILSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCH 686

Query: 90  RIGQTKPVHVYRLATAQSVE 31
           RIGQ+KPVHVYRLATAQS+E
Sbjct: 687 RIGQSKPVHVYRLATAQSIE 706


>dbj|BAG30708.1| decrease in DNA methylation 1b [Brassica rapa]
          Length = 766

 Score =  155 bits (391), Expect = 4e-36
 Identities = 74/80 (92%), Positives = 77/80 (96%)
 Frame = -1

Query: 270 LEERRRQIKEFNDENSTYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCH 91
           L+ERRRQI EFNDE S+ RIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCH
Sbjct: 575 LDERRRQIDEFNDEKSSCRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCH 634

Query: 90  RIGQTKPVHVYRLATAQSVE 31
           RIGQTKPVHVYRLATAQS+E
Sbjct: 635 RIGQTKPVHVYRLATAQSIE 654


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