BLASTX nr result

ID: Cephaelis21_contig00042375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00042375
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containi...    84   2e-14
ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containi...    81   8e-14
ref|XP_002533488.1| pentatricopeptide repeat-containing protein,...    81   8e-14
ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containi...    79   3e-13
ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat...    79   5e-13

>ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 35/72 (48%), Positives = 54/72 (75%)
 Frame = -2

Query: 250 SFASLLQNCTNQKSILNGKAVHARLILSGWMPDVYTNNHLLAMYLKLNRMEYAMKVFDRM 71
           +F+ +LQ C+N K++  GK VH ++I++G++P +Y  N LL  Y K ++M YA KVFDRM
Sbjct: 8   TFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRM 67

Query: 70  PKRNIISWTTLV 35
           P+R++ISW TL+
Sbjct: 68  PQRDVISWNTLI 79



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/88 (29%), Positives = 51/88 (57%)
 Frame = -2

Query: 265 LPIMNSFASLLQNCTNQKSILNGKAVHARLILSGWMPDVYTNNHLLAMYLKLNRMEYAMK 86
           +P   ++A++L  C N  +I  GK +HA+++      DVY  + L+ MY K   M+ +  
Sbjct: 539 IPDNYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRL 598

Query: 85  VFDRMPKRNIISWTTLVSSLSQRGHSEK 2
           +F++ PKR+ ++W+ ++ + +  G  EK
Sbjct: 599 MFEKAPKRDYVTWSAMICAYAYHGLGEK 626


>ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
           gi|449528041|ref|XP_004171015.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 868

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 35/82 (42%), Positives = 55/82 (67%)
 Frame = -2

Query: 250 SFASLLQNCTNQKSILNGKAVHARLILSGWMPDVYTNNHLLAMYLKLNRMEYAMKVFDRM 71
           +F+ + Q C+N++++  GK  HA +ILSG+ P V+  N L+ MY+K   +EYA KVF+ M
Sbjct: 26  TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85

Query: 70  PKRNIISWTTLVSSLSQRGHSE 5
           P+R+I+SW T+V   +  G  E
Sbjct: 86  PQRDIVSWNTMVFGCAGAGRME 107



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 24/83 (28%), Positives = 47/83 (56%)
 Frame = -2

Query: 250 SFASLLQNCTNQKSILNGKAVHARLILSGWMPDVYTNNHLLAMYLKLNRMEYAMKVFDRM 71
           ++A++L  C N  ++  GK +HA++I    + DVY  + L+ MY K   M  ++ +F + 
Sbjct: 563 TYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKA 622

Query: 70  PKRNIISWTTLVSSLSQRGHSEK 2
           PKR+ ++W  ++   +  G  E+
Sbjct: 623 PKRDSVTWNAMICGFAYHGLGEE 645


>ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526650|gb|EEF28892.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 939

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 33/81 (40%), Positives = 59/81 (72%)
 Frame = -2

Query: 256 MNSFASLLQNCTNQKSILNGKAVHARLILSGWMPDVYTNNHLLAMYLKLNRMEYAMKVFD 77
           + +F+ ++Q C++  S+  GK  HAR+I+SG++PDVY +N L+ MYL+ + + YA KVF+
Sbjct: 43  IRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFE 102

Query: 76  RMPKRNIISWTTLVSSLSQRG 14
           +M +R++IS+ T++S  +  G
Sbjct: 103 KMSQRDVISYNTMISGYADAG 123



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/86 (30%), Positives = 51/86 (59%)
 Frame = -2

Query: 262 PIMNSFASLLQNCTNQKSILNGKAVHARLILSGWMPDVYTNNHLLAMYLKLNRMEYAMKV 83
           P   ++ S+L+ C++Q+++ +G  +H R+I SG   D +    L+ MY K   +E A K+
Sbjct: 477 PDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKI 536

Query: 82  FDRMPKRNIISWTTLVSSLSQRGHSE 5
            DR+ ++ ++SW  +++  +   HSE
Sbjct: 537 HDRIEQQTMVSWNAIIAGFTLLKHSE 562


>ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 33/80 (41%), Positives = 55/80 (68%)
 Frame = -2

Query: 250 SFASLLQNCTNQKSILNGKAVHARLILSGWMPDVYTNNHLLAMYLKLNRMEYAMKVFDRM 71
           +F+ +LQ C+N K++  GK  HA++I++ ++P +Y  N L+  Y K + M YA KVFDRM
Sbjct: 8   TFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDRM 67

Query: 70  PKRNIISWTTLVSSLSQRGH 11
           P R++ISW T++   ++ G+
Sbjct: 68  PHRDVISWNTMIFGYAEIGN 87



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/88 (29%), Positives = 52/88 (59%)
 Frame = -2

Query: 265 LPIMNSFASLLQNCTNQKSILNGKAVHARLILSGWMPDVYTNNHLLAMYLKLNRMEYAMK 86
           +P   ++A++L  C N  +I  GK +HA+++      DVY  + L+ MY K   M+ +  
Sbjct: 539 IPDNFTYATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRL 598

Query: 85  VFDRMPKRNIISWTTLVSSLSQRGHSEK 2
           +F++ PKR+ ++W+ ++ + +  GH E+
Sbjct: 599 MFEKTPKRDYVTWSAMICAYAYHGHGEQ 626


>ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Vitis vinifera]
          Length = 681

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 33/78 (42%), Positives = 52/78 (66%)
 Frame = -2

Query: 253 NSFASLLQNCTNQKSILNGKAVHARLILSGWMPDVYTNNHLLAMYLKLNRMEYAMKVFDR 74
           N+ A ++Q     K +  GK +HA LI +G+ P  +  NHL+ MY K   +++A+K+FD 
Sbjct: 6   NALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDT 65

Query: 73  MPKRNIISWTTLVSSLSQ 20
           MP+RN++SWT ++S LSQ
Sbjct: 66  MPQRNLVSWTAMISGLSQ 83


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