BLASTX nr result

ID: Cephaelis21_contig00042273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00042273
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001077508.1| poor homologous synapsis 1 [Arabidopsis thal...    99   5e-19
ref|NP_172541.2| poor homologous synapsis 1 [Arabidopsis thalian...    99   5e-19
ref|XP_002527914.1| conserved hypothetical protein [Ricinus comm...    98   8e-19
ref|XP_002889827.1| predicted protein [Arabidopsis lyrata subsp....    94   1e-17
ref|XP_002314603.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15

>ref|NP_001077508.1| poor homologous synapsis 1 [Arabidopsis thaliana]
           gi|71905395|gb|AAZ52675.1| hypothetical protein
           At1g10710 [Arabidopsis thaliana]
           gi|332190511|gb|AEE28632.1| poor homologous synapsis 1
           [Arabidopsis thaliana]
          Length = 349

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 53/119 (44%), Positives = 71/119 (59%)
 Frame = +2

Query: 11  NSTNQHPSLVYRSTVQRRIRRGGVWISTSPSVPFNSSAAGTAGDHASLKFIAECSADVAL 190
           +S + HP L      ++     G W+S S S               SL  + E +    +
Sbjct: 35  SSPSPHPVLKPLGKREQYHSPHGTWLSASSST-------------VSLHIVDELNRSDVI 81

Query: 191 LNLSVRCKVLEEHRISKLNFTWPHVSCVSGFPARGARSVFVSYKDSLGQVQKFALRFST 367
           L++ +  KVLEEH ISKLNFTWP +SCVSGFP+RG+R++FV+Y DS  Q+QKFALRFST
Sbjct: 82  LSVKLGQKVLEEHYISKLNFTWPQMSCVSGFPSRGSRAIFVTYMDSANQIQKFALRFST 140


>ref|NP_172541.2| poor homologous synapsis 1 [Arabidopsis thaliana]
           gi|60547545|gb|AAX23736.1| hypothetical protein
           At1g10710 [Arabidopsis thaliana]
           gi|71905393|gb|AAZ52674.1| hypothetical protein
           At1g10710 [Arabidopsis thaliana]
           gi|332190510|gb|AEE28631.1| poor homologous synapsis 1
           [Arabidopsis thaliana]
          Length = 410

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 53/119 (44%), Positives = 71/119 (59%)
 Frame = +2

Query: 11  NSTNQHPSLVYRSTVQRRIRRGGVWISTSPSVPFNSSAAGTAGDHASLKFIAECSADVAL 190
           +S + HP L      ++     G W+S S S               SL  + E +    +
Sbjct: 35  SSPSPHPVLKPLGKREQYHSPHGTWLSASSST-------------VSLHIVDELNRSDVI 81

Query: 191 LNLSVRCKVLEEHRISKLNFTWPHVSCVSGFPARGARSVFVSYKDSLGQVQKFALRFST 367
           L++ +  KVLEEH ISKLNFTWP +SCVSGFP+RG+R++FV+Y DS  Q+QKFALRFST
Sbjct: 82  LSVKLGQKVLEEHYISKLNFTWPQMSCVSGFPSRGSRAIFVTYMDSANQIQKFALRFST 140


>ref|XP_002527914.1| conserved hypothetical protein [Ricinus communis]
           gi|223532689|gb|EEF34471.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 303

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 57/118 (48%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
 Frame = +2

Query: 26  HPSLVYRSTVQRRIRRGGVWIST-SPSVPFNSSAAGTAGDHASLKFIAECSADVALLNLS 202
           HPSL+  S   R     G W+S+ SP+              ASL+     S   A+L + 
Sbjct: 42  HPSLIPFSNSCRYKGTRGTWLSSHSPT--------------ASLQIRNYKSISHAVLTVC 87

Query: 203 VRCKVLEEHRISKLNFTWPHVSCVSGFPARGARSVFVSYKDSLGQVQKFALRFSTSFE 376
           +   +LEEH +SKL+FTWP VSC+SG+P RG+RS+FVSYKDSLGQ+QKFALRFS   E
Sbjct: 88  LHGNILEEHYVSKLHFTWPLVSCLSGYPPRGSRSLFVSYKDSLGQIQKFALRFSVISE 145


>ref|XP_002889827.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335669|gb|EFH66086.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 412

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 48/97 (49%), Positives = 62/97 (63%)
 Frame = +2

Query: 77  GVWISTSPSVPFNSSAAGTAGDHASLKFIAECSADVALLNLSVRCKVLEEHRISKLNFTW 256
           G W S S S               SL+   E +    +L++ +  KVLEEH ISKLNFTW
Sbjct: 57  GTWFSASSST-------------LSLQMFDEVNRSDVILSVKLGEKVLEEHYISKLNFTW 103

Query: 257 PHVSCVSGFPARGARSVFVSYKDSLGQVQKFALRFST 367
           P +SCVSGFP+RG+R++FV+Y DS  ++QKFALRFST
Sbjct: 104 PQMSCVSGFPSRGSRAIFVTYTDSANKIQKFALRFST 140


>ref|XP_002314603.1| predicted protein [Populus trichocarpa] gi|222863643|gb|EEF00774.1|
           predicted protein [Populus trichocarpa]
          Length = 306

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 50/107 (46%), Positives = 68/107 (63%), Gaps = 11/107 (10%)
 Frame = +2

Query: 89  STSPSV---PFNSSAAGTAGDH-------ASLKFIA-ECSADVALLNLSVRCKVLEEHRI 235
           ST PS+   P N     T G         ASL+ +  + ++  A+L LS+   VLEEH +
Sbjct: 45  STCPSLIPLPHNRKCRPTRGTWISSVSATASLQLLNYQSNSKDAILGLSLNGTVLEEHYV 104

Query: 236 SKLNFTWPHVSCVSGFPARGARSVFVSYKDSLGQVQKFALRFSTSFE 376
            KL+F+WP VSCVSG+P+RG R+VFV++KDSL ++QKF  RFST  E
Sbjct: 105 WKLHFSWPQVSCVSGYPSRGTRAVFVTFKDSLDEIQKFGFRFSTFSE 151


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