BLASTX nr result

ID: Cephaelis21_contig00042243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00042243
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containi...   100   9e-20
ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19
ref|XP_003617308.1| Auxin response factor [Medicago truncatula] ...   100   2e-19
emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]   100   2e-19
ref|XP_002307901.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14

>ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  100 bits (250), Expect = 9e-20
 Identities = 46/78 (58%), Positives = 63/78 (80%)
 Frame = -3

Query: 238 IGHIDNARCLLNKVPDANIVLFNTLIKGYVDNGRFDDAKVFIKDSMLSAGFQPDSYTYNI 59
           +G +D AR LLNK+P+ N VL+NTLI GYV +GRF++AK  + ++M+ AG++PD+YT+NI
Sbjct: 323 MGQVDEARALLNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNI 382

Query: 58  LIDGLCKKGSLVSACEAL 5
           +IDGL KKG LVSA E L
Sbjct: 383 MIDGLVKKGYLVSALELL 400


>ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 49/78 (62%), Positives = 58/78 (74%)
 Frame = -3

Query: 238 IGHIDNARCLLNKVPDANIVLFNTLIKGYVDNGRFDDAKVFIKDSMLSAGFQPDSYTYNI 59
           +G +D AR LLNKVP+ N+VLFNTLI GYV  GR D+AK  + +SMLS G  PD +TYN 
Sbjct: 353 MGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNT 412

Query: 58  LIDGLCKKGSLVSACEAL 5
           LI GLCKKG LVSA E +
Sbjct: 413 LILGLCKKGYLVSARELM 430


>ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
           gi|355518643|gb|AET00267.1| Auxin response factor
           [Medicago truncatula]
          Length = 948

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 45/78 (57%), Positives = 63/78 (80%)
 Frame = -3

Query: 238 IGHIDNARCLLNKVPDANIVLFNTLIKGYVDNGRFDDAKVFIKDSMLSAGFQPDSYTYNI 59
           +G +D AR +L+K+P+ N VL+NTLI GYV +GRF++AK  +  +M+ AGF+PD++T+NI
Sbjct: 318 MGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNI 377

Query: 58  LIDGLCKKGSLVSACEAL 5
           +IDGLCKKG LVSA E L
Sbjct: 378 MIDGLCKKGYLVSALEFL 395


>emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 49/78 (62%), Positives = 58/78 (74%)
 Frame = -3

Query: 238 IGHIDNARCLLNKVPDANIVLFNTLIKGYVDNGRFDDAKVFIKDSMLSAGFQPDSYTYNI 59
           +G +D AR LLNKVP+ N+VLFNTLI GYV  GR D+AK  + +SMLS G  PD +TYN 
Sbjct: 335 MGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNT 394

Query: 58  LIDGLCKKGSLVSACEAL 5
           LI GLCKKG LVSA E +
Sbjct: 395 LILGLCKKGYLVSARELM 412


>ref|XP_002307901.1| predicted protein [Populus trichocarpa] gi|222853877|gb|EEE91424.1|
           predicted protein [Populus trichocarpa]
          Length = 724

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 37/73 (50%), Positives = 53/73 (72%)
 Frame = -3

Query: 229 IDNARCLLNKVPDANIVLFNTLIKGYVDNGRFDDAKVFIKDSMLSAGFQPDSYTYNILID 50
           ID A+ LL+KVP  N+V FNTL+ G+V NGR ++A  F+ D M++ G+ PD +T++ L++
Sbjct: 331 IDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVN 390

Query: 49  GLCKKGSLVSACE 11
           GLCKKG   SA E
Sbjct: 391 GLCKKGLFGSALE 403


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