BLASTX nr result

ID: Cephaelis21_contig00042213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00042213
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demis...    59   4e-07
gb|ABD32279.2| reverse transcriptase, putative [Medicago truncat...    45   5e-06

>gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demissum]
          Length = 1155

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/71 (40%), Positives = 39/71 (54%)
 Frame = -3

Query: 213 FLSRRSEVFG*FMKTLNKYEQVLGQKVNKSKSCFIVGNKSTDYLRARVAHTTSFSCHALP 34
           F +   E    F++TL+ YE   GQ +NK+KSCF V N +     A++   T  +    P
Sbjct: 609 FCNGSKETLEMFLRTLHIYENTSGQLINKNKSCFSVANNAKQNFIAKIKLITCMNHQEFP 668

Query: 33  IKYLGCPLYVG 1
           IKYLGCPL  G
Sbjct: 669 IKYLGCPLISG 679


>gb|ABD32279.2| reverse transcriptase, putative [Medicago truncatula]
          Length = 480

 Score = 45.1 bits (105), Expect(2) = 5e-06
 Identities = 22/59 (37%), Positives = 33/59 (55%)
 Frame = -3

Query: 177 MKTLNKYEQVLGQKVNKSKSCFIVGNKSTDYLRARVAHTTSFSCHALPIKYLGCPLYVG 1
           +K  N Y +V  Q +N +KS F  G  +T + +  +A T  FS   +P  YLGCP++ G
Sbjct: 175 LKFFNDYSEVSAQIINNNKSQFYAGAMTTSHSQM-IAGTLGFSADNIPFFYLGCPIFKG 232



 Score = 30.0 bits (66), Expect(2) = 5e-06
 Identities = 11/20 (55%), Positives = 17/20 (85%)
 Frame = -1

Query: 245 THLAYADDVIIFSAGDQRSL 186
           TH+ YADDV+IF AG ++++
Sbjct: 152 THILYADDVLIFCAGTKQNI 171


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