BLASTX nr result

ID: Cephaelis21_contig00042171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00042171
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containi...   127   7e-28
emb|CBI17228.3| unnamed protein product [Vitis vinifera]              127   7e-28
ref|XP_002300166.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-26
ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   115   5e-24
ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containi...   115   5e-24

>ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Vitis vinifera]
          Length = 677

 Score =  127 bits (320), Expect = 7e-28
 Identities = 59/74 (79%), Positives = 67/74 (90%)
 Frame = +3

Query: 3   EEKEDSLESHSEKLALAFGLISTGPSVVIRIVKNLRMCGDCHSLMKYVSKLSQREIVVRD 182
           EEKED+L SHSEKLALAFGLIST P   IRIVKNLR+CGDCHS+MKY SKLS+REI++RD
Sbjct: 600 EEKEDALGSHSEKLALAFGLISTAPGSTIRIVKNLRVCGDCHSMMKYASKLSRREIILRD 659

Query: 183 IKCFHHFKNGSCSC 224
           IK FHHFK+G+CSC
Sbjct: 660 IKRFHHFKDGTCSC 673


>emb|CBI17228.3| unnamed protein product [Vitis vinifera]
          Length = 590

 Score =  127 bits (320), Expect = 7e-28
 Identities = 59/74 (79%), Positives = 67/74 (90%)
 Frame = +3

Query: 3   EEKEDSLESHSEKLALAFGLISTGPSVVIRIVKNLRMCGDCHSLMKYVSKLSQREIVVRD 182
           EEKED+L SHSEKLALAFGLIST P   IRIVKNLR+CGDCHS+MKY SKLS+REI++RD
Sbjct: 513 EEKEDALGSHSEKLALAFGLISTAPGSTIRIVKNLRVCGDCHSMMKYASKLSRREIILRD 572

Query: 183 IKCFHHFKNGSCSC 224
           IK FHHFK+G+CSC
Sbjct: 573 IKRFHHFKDGTCSC 586


>ref|XP_002300166.1| predicted protein [Populus trichocarpa] gi|222847424|gb|EEE84971.1|
           predicted protein [Populus trichocarpa]
          Length = 719

 Score =  122 bits (306), Expect = 3e-26
 Identities = 56/76 (73%), Positives = 66/76 (86%)
 Frame = +3

Query: 3   EEKEDSLESHSEKLALAFGLISTGPSVVIRIVKNLRMCGDCHSLMKYVSKLSQREIVVRD 182
           EEKED L SH EKLALAF LI T P + IRIVKNL++CGDCHSLMKY SK+SQREI++RD
Sbjct: 642 EEKEDVLGSHGEKLALAFALICTSPGMTIRIVKNLQVCGDCHSLMKYASKISQREIMLRD 701

Query: 183 IKCFHHFKNGSCSCQE 230
           +K FHHFK+GSCSC++
Sbjct: 702 MKRFHHFKDGSCSCRD 717


>ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g33170-like [Cucumis sativus]
          Length = 1573

 Score =  115 bits (287), Expect = 5e-24
 Identities = 52/74 (70%), Positives = 63/74 (85%)
 Frame = +3

Query: 3    EEKEDSLESHSEKLALAFGLISTGPSVVIRIVKNLRMCGDCHSLMKYVSKLSQREIVVRD 182
            EEKE +L  HSEKLA+AFGLIST PS  IR++KNLR+CGDCHS +K +SKL+QREIV+RD
Sbjct: 1496 EEKERALYYHSEKLAIAFGLISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRD 1555

Query: 183  IKCFHHFKNGSCSC 224
               FHHF+NG+CSC
Sbjct: 1556 ANRFHHFRNGTCSC 1569


>ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Cucumis sativus]
          Length = 1573

 Score =  115 bits (287), Expect = 5e-24
 Identities = 52/74 (70%), Positives = 63/74 (85%)
 Frame = +3

Query: 3    EEKEDSLESHSEKLALAFGLISTGPSVVIRIVKNLRMCGDCHSLMKYVSKLSQREIVVRD 182
            EEKE +L  HSEKLA+AFGLIST PS  IR++KNLR+CGDCHS +K +SKL+QREIV+RD
Sbjct: 1496 EEKERALYYHSEKLAIAFGLISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRD 1555

Query: 183  IKCFHHFKNGSCSC 224
               FHHF+NG+CSC
Sbjct: 1556 ANRFHHFRNGTCSC 1569