BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00042037
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...   138   6e-31
gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]             137   2e-30
gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]         131   8e-29
dbj|BAM28751.1| reverse transcriptase-like protein, partial [Cam...   131   1e-28
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]             127   1e-27

>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score =  138 bits (348), Expect = 6e-31
 Identities = 72/181 (39%), Positives = 99/181 (54%), Gaps = 1/181 (0%)
 Frame = +1

Query: 1    LFQSLYGKITARISNWKTSPLSTVGRVTLAKSVLSSSSNYVLGYFKIPLTVDNRIDRQIA 180
            LFQSL  ++  R+  W+   LS  G+  L K+V  +  NY +  F++P    + I++ +A
Sbjct: 1052 LFQSLPDRVWNRVHGWEGKLLSKAGKEVLIKTVAQAIPNYTMSVFQLPAGTSDAINKCVA 1111

Query: 181  RFIWKGDTDGGGIHWTSWNHLCTSKLLGGLGMRATPHLNQAFLAKLAWKIHSEKDSFFAR 360
            RF W G   G GIHW  W+ LC SK  GGLG R     NQA L K  W++    DS  AR
Sbjct: 1112 RFWW-GKEGGKGIHWRRWSDLCFSKKDGGLGFRDLSLFNQALLGKQGWRLMMYPDSLVAR 1170

Query: 361  FFLSKYCQRQDFLLVTPKSGITWGWRGILWGRELLRKGLIWQVKGGGKISV-TDNWIPQT 537
               +KY    DF+     S  ++ WR  LWGRELLRKG+ W++  G ++ V  D W+P  
Sbjct: 1171 MLKAKYFPWDDFMEAELGSSPSYLWRSFLWGRELLRKGVRWRIGDGKEVRVFIDPWVPGL 1230

Query: 538  P 540
            P
Sbjct: 1231 P 1231


>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
          Length = 1023

 Score =  137 bits (344), Expect = 2e-30
 Identities = 69/188 (36%), Positives = 108/188 (57%), Gaps = 2/188 (1%)
 Frame = +1

Query: 1    LFQSLYGKITARISNWKTSPLSTVGRVTLAKSVLSSSSNYVLGYFKIPLTVDNRIDRQIA 180
            +F  +  ++  RI+ W    LS  G+  + KSV++    YV+  F++P T+ +++   +A
Sbjct: 614  IFSFVRDRLQTRINGWSAKFLSKGGKEVMIKSVVAVLPTYVMSCFRLPKTITSKLTSAVA 673

Query: 181  RFIWKGDTDGGGIHWTSWNHLCTSKLLGGLGMRATPHLNQAFLAKLAWKIHSEKDSFFAR 360
            +F W  D +  G+HW +WN LC+SK  GGLG R+    N A LAK  W++ +  DS FA+
Sbjct: 674  KFWWSSDGESRGMHWMAWNKLCSSKADGGLGFRSVNDFNSALLAKQLWRLITVPDSLFAK 733

Query: 361  FFLSKYCQRQDFLLVTPKSGITWGWRGILWGRELLRKGLIWQVKGGGKISV-TDNWIP-Q 534
             F  +Y ++ + L        ++GWR I+  R L++KGLI +V  G  ISV  D WIP Q
Sbjct: 734  VFKGRYFRKSNPLDKLKSYSPSYGWRSIISARSLVKKGLINRVGSGASISVWEDPWIPAQ 793

Query: 535  TPVPKLAN 558
             P P ++N
Sbjct: 794  FPRPAISN 801


>gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]
          Length = 593

 Score =  131 bits (330), Expect = 8e-29
 Identities = 70/188 (37%), Positives = 105/188 (55%), Gaps = 5/188 (2%)
 Frame = +1

Query: 34  RISNWKTSPLSTVGRVTLAKSVLSSSSNYVLGYFKIPLTVDNRIDRQIARFIWKGDTDGG 213
           +  +WK   LS  GR  + KSVL S S Y++G F++P    +RI++ +  F W GD +G 
Sbjct: 15  KFGSWKVRTLSRAGREIMIKSVLQSISTYIMGCFELPEGTCDRIEKMMCNFYWGGDRNGS 74

Query: 214 GIHWTSWNHLCTSKLLGGLGMRATPHLNQAFLAKLAWKIHSEKDSFFARFFLSKYCQRQD 393
            +HW SW  LC SK  GGLG R   + N+A LAK  W++ +  +S  A    +KY  R+ 
Sbjct: 75  KMHWRSWEKLCRSKRNGGLGFRRLKNFNRAMLAKQGWRLLTLPNSLAATILRAKYYPRKS 134

Query: 394 FLLVTPKSGITWGWRGILWGRELLRKGLIWQVKGGGKISV-TDNWIP--QTPVPKL--AN 558
            L ++     ++ WR IL G +LL+KG+ W++  G  +   +D WIP   T +PK     
Sbjct: 135 PLEISSSPYSSYTWRSILKGSQLLQKGIEWRIGQGNTVRTWSDPWIPGSDTGLPKYHSPG 194

Query: 559 SLLGSHIS 582
           S L +H+S
Sbjct: 195 SDLYTHVS 202


>dbj|BAM28751.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score =  131 bits (329), Expect = 1e-28
 Identities = 65/172 (37%), Positives = 90/172 (52%), Gaps = 1/172 (0%)
 Frame = +1

Query: 22  KITARISNWKTSPLSTVGRVTLAKSVLSSSSNYVLGYFKIPLTVDNRIDRQIARFIWKGD 201
           ++ +R++ WK   LS  GR  L KSV  +   Y++  F++P  V   I+  +  F W   
Sbjct: 20  RVWSRLNGWKEKSLSVAGREVLIKSVAQAIPTYIMSCFRLPDGVCXEIESMVCNFWWGQK 79

Query: 202 TDGGGIHWTSWNHLCTSKLLGGLGMRATPHLNQAFLAKLAWKIHSEKDSFFARFFLSKYC 381
            +   IHWTSW  LC SKL GG+G R   H N A LAK  W++     S  AR F ++Y 
Sbjct: 80  EETRKIHWTSWKQLCKSKLRGGMGFRCLQHFNSALLAKQCWRLXQRPQSLVARVFKARYF 139

Query: 382 QRQDFLLVTPKSGITWGWRGILWGRELLRKGLIWQVKGGGKISVT-DNWIPQ 534
            +  FL     S  ++ WR I+  R LL  GL W+V  G  ISV  D W+P+
Sbjct: 140 PQTSFLDALVGSNPSFTWRSIVGSRRLLNAGLRWRVGNGASISVKYDKWVPR 191


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score =  127 bits (320), Expect = 1e-27
 Identities = 57/174 (32%), Positives = 97/174 (55%)
 Frame = +1

Query: 4    FQSLYGKITARISNWKTSPLSTVGRVTLAKSVLSSSSNYVLGYFKIPLTVDNRIDRQIAR 183
            F ++  K+  ++S+WK S L+  GR  L ++ L++   Y +    +P++  N ID+    
Sbjct: 1301 FNAVIDKMRTKLSSWKASSLNMAGRRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRN 1360

Query: 184  FIWKGDTDGGGIHWTSWNHLCTSKLLGGLGMRATPHLNQAFLAKLAWKIHSEKDSFFARF 363
            F+W  DT+   +H  +W  +C  +  GGLG+R     N+AFL K+AW+I S  D  + + 
Sbjct: 1361 FLWGHDTNTRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKV 1420

Query: 364  FLSKYCQRQDFLLVTPKSGITWGWRGILWGRELLRKGLIWQVKGGGKISVTDNW 525
               KY +  DFL +  +S  +WGWR I+ G+++L   + W V  G KI+  ++W
Sbjct: 1421 LREKYVKNADFLHLQSQSNCSWGWRSIMKGKDVLAGAIKWNVGNGRKINFWNDW 1474