BLASTX nr result

ID: Cephaelis21_contig00042033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00042033
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271900.2| PREDICTED: probable E3 ubiquitin-protein lig...   164   5e-39
ref|XP_003538429.1| PREDICTED: probable E3 ubiquitin-protein lig...   163   2e-38
emb|CAN69973.1| hypothetical protein VITISV_001453 [Vitis vinifera]   163   2e-38
ref|XP_002524221.1| Serine/threonine-protein kinase Nek8, putati...   162   2e-38
dbj|BAJ89345.1| predicted protein [Hordeum vulgare subsp. vulgare]    162   3e-38

>ref|XP_002271900.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like isoform
           1 [Vitis vinifera]
          Length = 514

 Score =  164 bits (416), Expect = 5e-39
 Identities = 80/125 (64%), Positives = 93/125 (74%), Gaps = 3/125 (2%)
 Frame = -2

Query: 368 GNEIPNSNTERKSPVVLMWGYLPGASQKRLPLLSPTAVQFLETG---DSWKDVCEGGCGF 198
           G+E      + +  VV MWGYLPGAS +  PLLSP  V    +    DSWKDVC GGCGF
Sbjct: 20  GSEGEGEAMKMEESVVYMWGYLPGASLQGSPLLSPVPVALPTSTLSEDSWKDVCGGGCGF 79

Query: 197 AVAISESGQVITWGSTDDQGQSYLTAGKHEENPEEFSLPTEAPILKAAAGWAHCVSISDR 18
           AVAISESG++ITWGS DD GQSYLT+G+H E PE F LPTEAPI+KAAAGWAHCVS++D+
Sbjct: 80  AVAISESGKLITWGSEDDLGQSYLTSGQHGETPEPFPLPTEAPIVKAAAGWAHCVSLTDK 139

Query: 17  GHVYT 3
           G  YT
Sbjct: 140 GEAYT 144


>ref|XP_003538429.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 480

 Score =  163 bits (412), Expect = 2e-38
 Identities = 79/127 (62%), Positives = 94/127 (74%)
 Frame = -2

Query: 383 EKMEIGNEIPNSNTERKSPVVLMWGYLPGASQKRLPLLSPTAVQFLETGDSWKDVCEGGC 204
           E M++  EI       K  +V MWGYLPGA  +R PLL+P  V+   +G SWKDVC GGC
Sbjct: 7   EAMQVEMEI------EKERLVYMWGYLPGALPQRTPLLTPVLVRVPPSGYSWKDVCGGGC 60

Query: 203 GFAVAISESGQVITWGSTDDQGQSYLTAGKHEENPEEFSLPTEAPILKAAAGWAHCVSIS 24
           GFA+AISE G++ITWGSTDD GQSY+T+GKH E PE F LPTE  I+KAAAGWAHCVS++
Sbjct: 61  GFAMAISEPGKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEVTIVKAAAGWAHCVSVT 120

Query: 23  DRGHVYT 3
           D G VYT
Sbjct: 121 DCGEVYT 127


>emb|CAN69973.1| hypothetical protein VITISV_001453 [Vitis vinifera]
          Length = 498

 Score =  163 bits (412), Expect = 2e-38
 Identities = 78/111 (70%), Positives = 88/111 (79%), Gaps = 3/111 (2%)
 Frame = -2

Query: 326 VVLMWGYLPGASQKRLPLLSPTAVQFLETG---DSWKDVCEGGCGFAVAISESGQVITWG 156
           VV MWGYLPGAS +  PLLSP  V    +    DSWKDVC GGCGFAVAISESG++ITWG
Sbjct: 7   VVYMWGYLPGASLQGSPLLSPVPVALPASTLSEDSWKDVCGGGCGFAVAISESGKLITWG 66

Query: 155 STDDQGQSYLTAGKHEENPEEFSLPTEAPILKAAAGWAHCVSISDRGHVYT 3
           S DD GQSYLT+G+H E PE F LPTEAPI+KAAAGWAHCVS++D+G  YT
Sbjct: 67  SEDDLGQSYLTSGQHGETPEPFPLPTEAPIVKAAAGWAHCVSLTDKGEAYT 117


>ref|XP_002524221.1| Serine/threonine-protein kinase Nek8, putative [Ricinus communis]
           gi|223536498|gb|EEF38145.1| Serine/threonine-protein
           kinase Nek8, putative [Ricinus communis]
          Length = 476

 Score =  162 bits (411), Expect = 2e-38
 Identities = 77/122 (63%), Positives = 91/122 (74%)
 Frame = -2

Query: 368 GNEIPNSNTERKSPVVLMWGYLPGASQKRLPLLSPTAVQFLETGDSWKDVCEGGCGFAVA 189
           G E+       K  +V MWGYLPGA  +R P+LSP  V+    G SWKDVC GGCGFA+A
Sbjct: 5   GKEVMKMEEMVKEKLVFMWGYLPGALPQRSPILSPVVVR--ADGYSWKDVCGGGCGFAMA 62

Query: 188 ISESGQVITWGSTDDQGQSYLTAGKHEENPEEFSLPTEAPILKAAAGWAHCVSISDRGHV 9
           ISESG++ITWGSTDD GQSY+T+GKH E PE F LPTEA I+KAAAGWAHC++ +D G V
Sbjct: 63  ISESGKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIMKAAAGWAHCIAATDTGEV 122

Query: 8   YT 3
           YT
Sbjct: 123 YT 124


>dbj|BAJ89345.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 500

 Score =  162 bits (409), Expect = 3e-38
 Identities = 74/113 (65%), Positives = 88/113 (77%), Gaps = 2/113 (1%)
 Frame = -2

Query: 335 KSPVVLMWGYLPGASQKRLPLLSPTAVQF--LETGDSWKDVCEGGCGFAVAISESGQVIT 162
           K  VVLMWGYLPG S +R PLL P  V+      GD+W+DVC GGCGFA+AISESG+++T
Sbjct: 34  KGQVVLMWGYLPGVSPQRSPLLGPVPVRLPPAAAGDAWRDVCGGGCGFAMAISESGKLLT 93

Query: 161 WGSTDDQGQSYLTAGKHEENPEEFSLPTEAPILKAAAGWAHCVSISDRGHVYT 3
           WGSTDD GQSY+TAGKHEE PE F LP++  I +A AGWAHCV+I+D G VYT
Sbjct: 94  WGSTDDMGQSYVTAGKHEETPEAFPLPSDVAIARADAGWAHCVAITDEGVVYT 146


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