BLASTX nr result

ID: Cephaelis21_contig00041982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00041982
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-...    43   4e-07
emb|CBI15109.3| unnamed protein product [Vitis vinifera]               43   4e-07
ref|XP_003631705.1| PREDICTED: LOW QUALITY PROTEIN: replication ...    42   5e-07
emb|CBI25136.3| unnamed protein product [Vitis vinifera]               42   5e-07
emb|CAN71402.1| hypothetical protein VITISV_006284 [Vitis vinifera]    43   8e-07

>ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit isoform
           1 [Vitis vinifera]
          Length = 625

 Score = 43.1 bits (100), Expect(2) = 4e-07
 Identities = 20/33 (60%), Positives = 25/33 (75%)
 Frame = +1

Query: 169 KVTKFQGASKSTPSKSVVAVNPDKAEAEELRNW 267
           KV  FQG S ST SKS+V VNPD  E+++LR+W
Sbjct: 385 KVGDFQGVSLSTLSKSIVLVNPDTPESKKLRSW 417



 Score = 35.8 bits (81), Expect(2) = 4e-07
 Identities = 15/35 (42%), Positives = 26/35 (74%)
 Frame = +3

Query: 327 GADLSRNTKGTARSMYF*QPSCLNIISNPSLGKGR 431
           G+D+S ++KG  +SMY+ + S  ++ SNPSLG+ +
Sbjct: 431 GSDISPSSKGGVKSMYYDRVSLSHVTSNPSLGEDK 465


>emb|CBI15109.3| unnamed protein product [Vitis vinifera]
          Length = 602

 Score = 43.1 bits (100), Expect(2) = 4e-07
 Identities = 20/33 (60%), Positives = 25/33 (75%)
 Frame = +1

Query: 169 KVTKFQGASKSTPSKSVVAVNPDKAEAEELRNW 267
           KV  FQG S ST SKS+V VNPD  E+++LR+W
Sbjct: 362 KVGDFQGVSLSTLSKSIVLVNPDTPESKKLRSW 394



 Score = 35.8 bits (81), Expect(2) = 4e-07
 Identities = 15/35 (42%), Positives = 26/35 (74%)
 Frame = +3

Query: 327 GADLSRNTKGTARSMYF*QPSCLNIISNPSLGKGR 431
           G+D+S ++KG  +SMY+ + S  ++ SNPSLG+ +
Sbjct: 408 GSDISPSSKGGVKSMYYDRVSLSHVTSNPSLGEDK 442


>ref|XP_003631705.1| PREDICTED: LOW QUALITY PROTEIN: replication factor A protein 1-like
           [Vitis vinifera]
          Length = 389

 Score = 41.6 bits (96), Expect(2) = 5e-07
 Identities = 19/33 (57%), Positives = 24/33 (72%)
 Frame = +1

Query: 169 KVTKFQGASKSTPSKSVVAVNPDKAEAEELRNW 267
           KV  FQG S ST SKS+  VNPD  E+++LR+W
Sbjct: 148 KVGDFQGVSLSTLSKSIALVNPDTPESKKLRSW 180



 Score = 37.0 bits (84), Expect(2) = 5e-07
 Identities = 16/35 (45%), Positives = 26/35 (74%)
 Frame = +3

Query: 327 GADLSRNTKGTARSMYF*QPSCLNIISNPSLGKGR 431
           G+D+S ++KG  RSMY+ + S  ++ SNPSLG+ +
Sbjct: 195 GSDISPSSKGGVRSMYYDRVSLSHVTSNPSLGEDK 229


>emb|CBI25136.3| unnamed protein product [Vitis vinifera]
          Length = 168

 Score = 41.6 bits (96), Expect(2) = 5e-07
 Identities = 19/33 (57%), Positives = 24/33 (72%)
 Frame = +1

Query: 169 KVTKFQGASKSTPSKSVVAVNPDKAEAEELRNW 267
           KV  FQG S ST SKS+  VNPD  E+++LR+W
Sbjct: 35  KVGDFQGVSLSTLSKSIALVNPDTPESKKLRSW 67



 Score = 37.0 bits (84), Expect(2) = 5e-07
 Identities = 16/35 (45%), Positives = 26/35 (74%)
 Frame = +3

Query: 327 GADLSRNTKGTARSMYF*QPSCLNIISNPSLGKGR 431
           G+D+S ++KG  RSMY+ + S  ++ SNPSLG+ +
Sbjct: 82  GSDISPSSKGGVRSMYYDRVSLSHVTSNPSLGEDK 116


>emb|CAN71402.1| hypothetical protein VITISV_006284 [Vitis vinifera]
          Length = 634

 Score = 43.1 bits (100), Expect(2) = 8e-07
 Identities = 20/33 (60%), Positives = 25/33 (75%)
 Frame = +1

Query: 169 KVTKFQGASKSTPSKSVVAVNPDKAEAEELRNW 267
           KV  FQG S ST SKS+V VNPD  E+++LR+W
Sbjct: 394 KVGDFQGVSLSTLSKSIVLVNPDTPESKKLRSW 426



 Score = 34.7 bits (78), Expect(2) = 8e-07
 Identities = 15/35 (42%), Positives = 25/35 (71%)
 Frame = +3

Query: 327 GADLSRNTKGTARSMYF*QPSCLNIISNPSLGKGR 431
           G+D+S ++KG   SMY+ + S  ++ SNPSLG+ +
Sbjct: 440 GSDISPSSKGGVXSMYYDRVSLSHVTSNPSLGEDK 474


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