BLASTX nr result

ID: Cephaelis21_contig00041774 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00041774
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279628.2| PREDICTED: pentatricopeptide repeat-containi...   126   2e-27
emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]   126   2e-27
ref|XP_002516112.1| pentatricopeptide repeat-containing protein,...   122   2e-26
ref|XP_002308534.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
ref|XP_003523650.1| PREDICTED: pentatricopeptide repeat-containi...   112   3e-23

>ref|XP_002279628.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g63330-like [Vitis vinifera]
          Length = 563

 Score =  126 bits (317), Expect = 2e-27
 Identities = 60/103 (58%), Positives = 76/103 (73%), Gaps = 2/103 (1%)
 Frame = -1

Query: 308 ENSKPPDPSNF--LNQFSSHLMPELVIRVIKDQTNPHRSLYFFNWASNLNHNPNNYFHTH 135
           +N  P  P++   L+QF+  L P LVI+VIK Q NP+ +L+FFNWASN N NPNNY H+H
Sbjct: 92  QNPTPNSPTSISPLSQFAPFLNPSLVIQVIKSQKNPYHALFFFNWASNPNPNPNNYSHSH 151

Query: 134 YCYIAITDKLISKKLFSLAENLLESHNRFSDFMVGKFIKAHGD 6
            CY+AITD LIS  LFS A +LL+SH+R SDF   KF+KA+GD
Sbjct: 152 LCYVAITDLLISHGLFSTASSLLQSHHRLSDFAAAKFVKAYGD 194


>emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
          Length = 912

 Score =  126 bits (316), Expect = 2e-27
 Identities = 60/103 (58%), Positives = 76/103 (73%), Gaps = 2/103 (1%)
 Frame = -1

Query: 308 ENSKPPDPSNF--LNQFSSHLMPELVIRVIKDQTNPHRSLYFFNWASNLNHNPNNYFHTH 135
           +N  P  P++   L+QF+  L P LVI+VIK Q NP+ +L+FFNWASN N NPNNY H+H
Sbjct: 92  QNPTPNSPTSISPLSQFAPFLNPXLVIQVIKSQKNPYHALFFFNWASNPNPNPNNYSHSH 151

Query: 134 YCYIAITDKLISKKLFSLAENLLESHNRFSDFMVGKFIKAHGD 6
            CY+AITD LIS  LFS A +LL+SH+R SDF   KF+KA+GD
Sbjct: 152 LCYVAITDLLISHGLFSTASSLLQSHHRLSDFAAAKFVKAYGD 194


>ref|XP_002516112.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544598|gb|EEF46114.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 461

 Score =  122 bits (307), Expect = 2e-26
 Identities = 56/91 (61%), Positives = 73/91 (80%)
 Frame = -1

Query: 275 LNQFSSHLMPELVIRVIKDQTNPHRSLYFFNWASNLNHNPNNYFHTHYCYIAITDKLISK 96
           LNQFS +L  +LVI VI+ Q+NP+ +L+FFNWASNL  NPNNYFH H+CY+AITD L+S 
Sbjct: 46  LNQFSPYLNSQLVIEVIRKQSNPYHALFFFNWASNLCPNPNNYFHNHHCYVAITDLLLSH 105

Query: 95  KLFSLAENLLESHNRFSDFMVGKFIKAHGDL 3
            LF+LA +LL++ N+ SD MV KFI A+G+L
Sbjct: 106 SLFALASSLLQNANKMSDLMVSKFIIAYGNL 136


>ref|XP_002308534.1| predicted protein [Populus trichocarpa] gi|222854510|gb|EEE92057.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score =  120 bits (301), Expect = 1e-25
 Identities = 59/104 (56%), Positives = 74/104 (71%), Gaps = 5/104 (4%)
 Frame = -1

Query: 305 NSKPPDPSNF----LNQFSSHLMPELVIRVIKDQT-NPHRSLYFFNWASNLNHNPNNYFH 141
           N + P+P +     LNQFS HL   LVI VIK+Q  NP+++L+FFNWASNLN NPNNY H
Sbjct: 37  NPQNPNPKHINPTHLNQFSPHLDSNLVIEVIKEQQPNPYQALFFFNWASNLNPNPNNYSH 96

Query: 140 THYCYIAITDKLISKKLFSLAENLLESHNRFSDFMVGKFIKAHG 9
            H CY+AI D L+S  LF +A+NLLE H  FSD +V K I+A+G
Sbjct: 97  NHRCYVAIIDLLLSHSLFPIAKNLLEKHGTFSDLLVSKLIRAYG 140


>ref|XP_003523650.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 472

 Score =  112 bits (280), Expect = 3e-23
 Identities = 58/101 (57%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
 Frame = -1

Query: 308 ENSKPPDPS-NFLNQFSSHLMPELVIRVIKDQTNPHRSLYFFNWASNLNHNPNNYFHTHY 132
           +N  P +P  + L +FSSHL P LVI VIK+Q NP  +L+FFNWASN N NPNNY HT  
Sbjct: 36  QNINPQNPDYSPLREFSSHLTPNLVIHVIKNQNNPQHALHFFNWASNPNPNPNNYSHTPL 95

Query: 131 CYIAITDKLISKKLFSLAENLLESHNRFSDFMVGKFIKAHG 9
           CY AITD L+S  LFS A +LL   NR SD +V +FI A G
Sbjct: 96  CYTAITDLLLSHSLFSTAFSLLRHSNRLSDNLVCRFINALG 136


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