BLASTX nr result

ID: Cephaelis21_contig00041761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00041761
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63105.1| polyprotein-like, related [Asparagus officinalis]       57   2e-06
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g...    56   3e-06
emb|CAN62092.1| hypothetical protein VITISV_022473 [Vitis vinifera]    56   4e-06
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc...    55   8e-06

>gb|ABD63105.1| polyprotein-like, related [Asparagus officinalis]
          Length = 289

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/57 (52%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
 Frame = -3

Query: 220 LTGTSAVS-TFSDVDIFILWQMRLGYIG*KGLTFLSKRGLLYS*NTGKMDFREHCIF 53
           +TG++AV+ + S VD   LW MRLG++G +GLT LSK+GLL   + GK+ F EH IF
Sbjct: 231 ITGSAAVALSMSGVDTIRLWHMRLGHMGERGLTELSKKGLLCGQSIGKLGFYEHYIF 287


>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
           gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
           Japonica Group]
          Length = 778

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/64 (50%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
 Frame = -3

Query: 223 ILTGTSAVS-TFSDVDIFILWQMRLGYIG*KGLTFLSKRGLLYS*NTGKMDFREHCIFFE 47
           IL   +AVS + S+ D   LW MRLG++   GL  LSKRGLLY  + GK+ F EHCIF +
Sbjct: 382 ILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLYGQSIGKLKFCEHCIFGK 441

Query: 46  DRNV 35
            + V
Sbjct: 442 HKRV 445


>emb|CAN62092.1| hypothetical protein VITISV_022473 [Vitis vinifera]
          Length = 318

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 25/39 (64%), Positives = 30/39 (76%)
 Frame = -3

Query: 169 LWQMRLGYIG*KGLTFLSKRGLLYS*NTGKMDFREHCIF 53
           LW MRLG++  KGLT LSKRGLL    TG++DF EHC+F
Sbjct: 160 LWHMRLGHMSDKGLTILSKRGLLDGQKTGELDFCEHCVF 198


>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1138

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/64 (48%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
 Frame = -3

Query: 223 ILTGTSAVS-TFSDVDIFILWQMRLGYIG*KGLTFLSKRGLLYS*NTGKMDFREHCIFFE 47
           IL   + VS + S+ D   LW MRLG++   GL  LSKRGLLY  + GK+ F EHCIF +
Sbjct: 334 ILGNVAVVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLYGQSIGKLKFCEHCIFGK 393

Query: 46  DRNV 35
            + V
Sbjct: 394 HKRV 397


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