BLASTX nr result

ID: Cephaelis21_contig00041649 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00041649
         (955 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309989.1| predicted protein [Populus trichocarpa] gi|2...    73   9e-11
ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|2...    71   3e-10
ref|XP_002324246.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-09
gb|AAD22368.1| putative non-LTR retroelement reverse transcripta...    63   9e-08
gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demis...    63   1e-07

>ref|XP_002309989.1| predicted protein [Populus trichocarpa] gi|222852892|gb|EEE90439.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 73.2 bits (178), Expect = 9e-11
 Identities = 51/148 (34%), Positives = 75/148 (50%), Gaps = 3/148 (2%)
 Frame = -2

Query: 459 HSQHMQRTIRRPIVVVWQCPVT--IMLNTDGSSLGNLSFSGAGVILCDSAGAVI*ASAHF 286
           H     R+ +    V W+ P    I LN DG S GN   +GAG ++ D  GA I   A  
Sbjct: 60  HGNDEGRSSKEDTQVGWKYPQEERIKLNVDGCSKGNPGVAGAGGVIRDHLGAWIGGFARN 119

Query: 285 LGHATSIEVEILALYKGLQLCRESGF*MVHLEVDSQLLVDFLTASAAWP*RLFSILQ*IQ 106
           +G  +S+  E+ A+Y GLQL  + GF  V LE DS+++V  +   +    R ++I+  I+
Sbjct: 120 IGICSSVNAELWAVYVGLQLAWDRGFRKVDLESDSKVVVGLINGDSVRVDRNYNIIMQIK 179

Query: 105 QYMVVDGH-TLSHVY*QVNSVADALVRH 25
             +  D   T  HVY + N VAD L  +
Sbjct: 180 GMLGRDWEVTTYHVYREANCVADWLANY 207


>ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|222863748|gb|EEF00879.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 50/148 (33%), Positives = 75/148 (50%), Gaps = 3/148 (2%)
 Frame = -2

Query: 459 HSQHMQRTIRRPIVVVWQCPVT--IMLNTDGSSLGNLSFSGAGVILCDSAGAVI*ASAHF 286
           H     R+ +    V W+ P    I LN DG S GN   +GAG ++ D  GA I   A  
Sbjct: 60  HGNDEGRSSKEDTQVGWKYPQEERIKLNVDGCSKGNPGVAGAGGVIRDHLGAWIGGFARN 119

Query: 285 LGHATSIEVEILALYKGLQLCRESGF*MVHLEVDSQLLVDFLTASAAWP*RLFSILQ*IQ 106
           +G  +S+  E+ A+Y GLQL  + GF  V LE DS+++V  +   +    R ++I+  I+
Sbjct: 120 IGICSSVNAELWAVYVGLQLAWDRGFRKVDLESDSKVVVGLINGDSVRVDRNYNIIMQIK 179

Query: 105 QYMVVDGH-TLSHVY*QVNSVADALVRH 25
             +  +   T  HVY + N VAD L  +
Sbjct: 180 GMLGRNWEVTTYHVYREANCVADWLANY 207


>ref|XP_002324246.1| predicted protein [Populus trichocarpa] gi|222865680|gb|EEF02811.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 49/148 (33%), Positives = 74/148 (50%), Gaps = 3/148 (2%)
 Frame = -2

Query: 459 HSQHMQRTIRRPIVVVWQCPVT--IMLNTDGSSLGNLSFSGAGVILCDSAGAVI*ASAHF 286
           H     R+ +    V W+ P    I LN DG S GN   +GAG ++ +  GA I   A  
Sbjct: 60  HGNDEGRSSKEDTQVGWKYPQEERIKLNVDGCSKGNPGVAGAGGVIREHLGAWIGGFARN 119

Query: 285 LGHATSIEVEILALYKGLQLCRESGF*MVHLEVDSQLLVDFLTASAAWP*RLFSILQ*IQ 106
           +   +S+  E+ A+Y GLQL  + GF  V LE DS+++V  +   +    R ++I+  I+
Sbjct: 120 IDICSSVNAELWAVYVGLQLAWDRGFRKVDLESDSKVVVGLINGDSVRVDRNYNIIMQIK 179

Query: 105 QYMVVDGH-TLSHVY*QVNSVADALVRH 25
             +  D   T  HVY + N VAD L  +
Sbjct: 180 DMLGRDWEVTTYHVYREANCVADWLANY 207


>gb|AAD22368.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 321

 Score = 63.2 bits (152), Expect = 9e-08
 Identities = 50/145 (34%), Positives = 72/145 (49%), Gaps = 3/145 (2%)
 Frame = -2

Query: 441 RTIRRPIVVVWQCPVT--IMLNTDGSSLGNLSFSGAGVILCDSAGAVI*ASAHFLGHATS 268
           R  R   +V W  P    + LNTDG+S GN  F+ AG +L D  GA I   A  +G  ++
Sbjct: 143 RVSRVERLVSWVSPEDGWVKLNTDGASRGNPGFATAGGVLRDHNGAWIGGFAVNIGVCSA 202

Query: 267 IEVEILALYKGLQLCRESGF*MVHLEVDSQLLVDFLTASAAWP*RLFSILQ*IQQYMVVD 88
              E+  +Y GL +    G   V LEVDS+++V FLT   A    L  +L+    ++   
Sbjct: 203 PLAELWGVYYGLFIAWGRGARRVELEVDSKMVVGFLTTGIADSHPLSFLLRLCYDFLSKG 262

Query: 87  GHT-LSHVY*QVNSVADALVRHTSS 16
               +SHVY + N +AD L  +  S
Sbjct: 263 WIVRISHVYREANRLADGLANYAFS 287


>gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demissum]
          Length = 1155

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 2/143 (1%)
 Frame = -2

Query: 423  IVVVWQCPVTIM--LNTDGSSLGNLSFSGAGVILCDSAGAVI*ASAHFLGHATSIEVEIL 250
            I V W  P T+   LNTDGS +      G G IL ++ G VI A    LG  TS   E +
Sbjct: 988  IRVNWIKPPTMFAKLNTDGSCVNGRC--GGGGILRNALGQVIMAFTIKLGEGTSSWAEAM 1045

Query: 249  ALYKGLQLCRESGF*MVHLEVDSQLLVDFLTASAAWP*RLFSILQ*IQQYMVVDGHTLSH 70
            ++  G+QLC + G  M+  E DS LL   +T + + P R++  ++ IQ+ +   G  ++H
Sbjct: 1046 SMLHGMQLCIQRGVNMIIGETDSILLAKAITENWSIPWRMYIPVKKIQKMVEEHGFIINH 1105

Query: 69   VY*QVNSVADALVRHTSSTHTSY 1
               + N  AD L   + ST  ++
Sbjct: 1106 CLREANQPADKLASISLSTDVNH 1128


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