BLASTX nr result

ID: Cephaelis21_contig00041626 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00041626
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containi...   160   1e-37
emb|CBI31119.3| unnamed protein product [Vitis vinifera]              160   1e-37
ref|XP_002526196.1| pentatricopeptide repeat-containing protein,...   159   3e-37
ref|XP_002327460.1| predicted protein [Populus trichocarpa] gi|2...   152   3e-35
gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsu...   150   8e-35

>ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 537

 Score =  160 bits (404), Expect = 1e-37
 Identities = 70/125 (56%), Positives = 95/125 (76%)
 Frame = +1

Query: 4   KSTYIWNTMIRAFAEQKKPWNAVLLSKEMMKHGFWLNNYTFSFVFRACAEIKDGSLGLLY 183
           ++++IWNTM+RAF ++K+P   + L K M+  GF  NNYTFSF+ +ACA++ D S G+L 
Sbjct: 76  RTSFIWNTMLRAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQLSDLSFGILL 135

Query: 184 HSQVIKLGWESYDFVQNGMIHFYAICDYMDMARNLFDRSQNKDVITWTAVINGYVKCGNF 363
           H+Q ++LGWE+YDFVQNG++H YA C+ MD AR LFD S N+DV+TWTAVINGY K G  
Sbjct: 136 HAQAVRLGWEAYDFVQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQV 195

Query: 364 EFARE 378
             AR+
Sbjct: 196 VVARQ 200


>emb|CBI31119.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score =  160 bits (404), Expect = 1e-37
 Identities = 70/125 (56%), Positives = 95/125 (76%)
 Frame = +1

Query: 4   KSTYIWNTMIRAFAEQKKPWNAVLLSKEMMKHGFWLNNYTFSFVFRACAEIKDGSLGLLY 183
           ++++IWNTM+RAF ++K+P   + L K M+  GF  NNYTFSF+ +ACA++ D S G+L 
Sbjct: 51  RTSFIWNTMLRAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQLSDLSFGILL 110

Query: 184 HSQVIKLGWESYDFVQNGMIHFYAICDYMDMARNLFDRSQNKDVITWTAVINGYVKCGNF 363
           H+Q ++LGWE+YDFVQNG++H YA C+ MD AR LFD S N+DV+TWTAVINGY K G  
Sbjct: 111 HAQAVRLGWEAYDFVQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQV 170

Query: 364 EFARE 378
             AR+
Sbjct: 171 VVARQ 175


>ref|XP_002526196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534500|gb|EEF36200.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 491

 Score =  159 bits (401), Expect = 3e-37
 Identities = 73/126 (57%), Positives = 93/126 (73%)
 Frame = +1

Query: 1   HKSTYIWNTMIRAFAEQKKPWNAVLLSKEMMKHGFWLNNYTFSFVFRACAEIKDGSLGLL 180
           H+ST+IWNT+IRAFAE+ +P  A++L K M+   F  NNYT+SF+F+AC ++ +  LGL 
Sbjct: 73  HRSTFIWNTVIRAFAEKNEPRKAIMLFKNMLYSNFLPNNYTYSFLFKACTDLNNLYLGLA 132

Query: 181 YHSQVIKLGWESYDFVQNGMIHFYAICDYMDMARNLFDRSQNKDVITWTAVINGYVKCGN 360
            H Q IKLGWE YDFVQNG++H +AI   MD AR LFD S N+DVITWTA+INGYV+ G 
Sbjct: 133 CHCQSIKLGWEFYDFVQNGLVHMFAIFGCMDSARKLFDLSSNRDVITWTALINGYVRAGQ 192

Query: 361 FEFARE 378
               RE
Sbjct: 193 VLIGRE 198


>ref|XP_002327460.1| predicted protein [Populus trichocarpa] gi|222836014|gb|EEE74435.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score =  152 bits (384), Expect = 3e-35
 Identities = 67/126 (53%), Positives = 92/126 (73%)
 Frame = +1

Query: 1   HKSTYIWNTMIRAFAEQKKPWNAVLLSKEMMKHGFWLNNYTFSFVFRACAEIKDGSLGLL 180
           +KST+IWNTM++AF E+ +   A  L K M++  +  NN+TFSFV RAC ++ +  +GL 
Sbjct: 74  NKSTFIWNTMMQAFVEKNEAVRAFSLYKHMLESNYLPNNFTFSFVIRACIDVFNLQMGLC 133

Query: 181 YHSQVIKLGWESYDFVQNGMIHFYAICDYMDMARNLFDRSQNKDVITWTAVINGYVKCGN 360
           +H QV+K GWESYDFVQNG+IH YA C +MD+ARN+FD S  +DV+TWT +I+GY+  G 
Sbjct: 134 FHGQVVKFGWESYDFVQNGLIHLYANCGFMDLARNMFDMSIKRDVVTWTCLISGYLNSGQ 193

Query: 361 FEFARE 378
              ARE
Sbjct: 194 VLIARE 199


>gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
           gi|227462998|gb|ACP39951.1| pentatricopeptide repeat
           protein [Gossypium hirsutum]
          Length = 532

 Score =  150 bits (380), Expect = 8e-35
 Identities = 74/126 (58%), Positives = 93/126 (73%)
 Frame = +1

Query: 1   HKSTYIWNTMIRAFAEQKKPWNAVLLSKEMMKHGFWLNNYTFSFVFRACAEIKDGSLGLL 180
           H++T+IWNT+IR F E+ +   A+ L K M++ GF  NNYTFSFV RAC +  +  +GL 
Sbjct: 72  HRTTFIWNTIIRIFVEKNENATALSLYKNMLQTGFLPNNYTFSFVLRACTD--NSPVGLA 129

Query: 181 YHSQVIKLGWESYDFVQNGMIHFYAICDYMDMARNLFDRSQNKDVITWTAVINGYVKCGN 360
            H+QVIKLGWESYDFV NG+IH YA    ++ AR LFD S  +DVITWTA+INGYVK G+
Sbjct: 130 SHAQVIKLGWESYDFVLNGLIHLYANWSSVEAARKLFDVSTCRDVITWTALINGYVKSGH 189

Query: 361 FEFARE 378
            EFARE
Sbjct: 190 VEFARE 195


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