BLASTX nr result

ID: Cephaelis21_contig00041579 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00041579
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002457671.1| hypothetical protein SORBIDRAFT_03g011415 [S...    74   2e-11
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    74   2e-11
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid...    72   4e-11
gb|EEE67582.1| hypothetical protein OsJ_25113 [Oryza sativa Japo...    71   8e-11
ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group] g...    71   8e-11

>ref|XP_002457671.1| hypothetical protein SORBIDRAFT_03g011415 [Sorghum bicolor]
           gi|241929646|gb|EES02791.1| hypothetical protein
           SORBIDRAFT_03g011415 [Sorghum bicolor]
          Length = 335

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 2/86 (2%)
 Frame = +1

Query: 58  DLKVQLEATYLAEELFWFQKSRVHWLKEGDRNTSYFHASNLQRS*QNRFGNLLKEGGGDC 237
           ++ V+LE     EE+ WFQ+SR +WL++GDRNTS+FH    +R  +N    L+ E G   
Sbjct: 48  EIMVRLELMLEQEEIHWFQRSRANWLRQGDRNTSFFHNFATKRRKKNTIKGLMDENGQRQ 107

Query: 238 ESEDEVVEEIANYYQNLFTS--GDVD 309
           E+E  +   I NY++N+FTS  GD D
Sbjct: 108 ENEIAMRNIIQNYFENIFTSEVGDPD 133


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/82 (42%), Positives = 49/82 (59%)
 Frame = +1

Query: 61  LKVQLEATYLAEELFWFQKSRVHWLKEGDRNTSYFHASNLQRS*QNRFGNLLKEGGGDCE 240
           LK +L   Y  EE FW +KSR+ W++ GDRNT YFHA+   R  QNR   L+ E G +  
Sbjct: 321 LKKELSQEYNNEEQFWQEKSRIMWMRNGDRNTKYFHAATKNRRAQNRIQKLIDEEGREWT 380

Query: 241 SEDEVVEEIANYYQNLFTSGDV 306
           S++++      Y++ LF S DV
Sbjct: 381 SDEDLGRVAEAYFKKLFASEDV 402


>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
           gi|7267666|emb|CAB78094.1| RNA-directed DNA
           polymerase-like protein [Arabidopsis thaliana]
          Length = 1274

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/78 (42%), Positives = 46/78 (58%)
 Frame = +1

Query: 70  QLEATYLAEELFWFQKSRVHWLKEGDRNTSYFHASNLQRS*QNRFGNLLKEGGGDCESED 249
           +LEA Y  EELFW Q SRV WL  GDRN  YFHA+   R   N    +    G +   E+
Sbjct: 265 ELEAAYRQEELFWKQWSRVQWLNSGDRNKGYFHATTRTRRMLNNLSVIEDGSGQEFHEEE 324

Query: 250 EVVEEIANYYQNLFTSGD 303
           ++   I++Y+QN+FT+ +
Sbjct: 325 QIASTISSYFQNIFTTSN 342


>gb|EEE67582.1| hypothetical protein OsJ_25113 [Oryza sativa Japonica Group]
          Length = 915

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/79 (44%), Positives = 49/79 (62%)
 Frame = +1

Query: 61  LKVQLEATYLAEELFWFQKSRVHWLKEGDRNTSYFHASNLQRS*QNRFGNLLKEGGGDCE 240
           LK +LE      + +W Q++ V WL++GDRNTS+FHA+  +R   NR G L KE G   E
Sbjct: 533 LKYKLEKLEEQVDTYWRQRAHVAWLQKGDRNTSFFHATCSERKRSNRIGRLKKEDGSWVE 592

Query: 241 SEDEVVEEIANYYQNLFTS 297
           SE+E    I  Y++N+F S
Sbjct: 593 SEEEKKSFIMQYFKNMFQS 611


>ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group]
           gi|113611795|dbj|BAF22173.1| Os07g0613900 [Oryza sativa
           Japonica Group]
          Length = 1453

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/79 (44%), Positives = 49/79 (62%)
 Frame = +1

Query: 61  LKVQLEATYLAEELFWFQKSRVHWLKEGDRNTSYFHASNLQRS*QNRFGNLLKEGGGDCE 240
           LK +LE      + +W Q++ V WL++GDRNTS+FHA+  +R   NR G L KE G   E
Sbjct: 570 LKYKLEKLEEQVDTYWRQRAHVAWLQKGDRNTSFFHATCSERKRSNRIGRLKKEDGSWVE 629

Query: 241 SEDEVVEEIANYYQNLFTS 297
           SE+E    I  Y++N+F S
Sbjct: 630 SEEEKKSFIMQYFKNMFQS 648


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