BLASTX nr result

ID: Cephaelis21_contig00040999 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00040999
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-13
ref|XP_002332412.1| predicted protein [Populus trichocarpa] gi|2...    62   1e-12
emb|CAN76142.1| hypothetical protein VITISV_007730 [Vitis vinifera]    60   9e-10
emb|CAN63923.1| hypothetical protein VITISV_004023 [Vitis vinifera]    57   2e-09
ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|2...    48   6e-09

>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
           predicted protein [Populus trichocarpa]
          Length = 819

 Score = 67.0 bits (162), Expect(2) = 2e-13
 Identities = 28/72 (38%), Positives = 43/72 (59%)
 Frame = -1

Query: 219 GGSDSGRRSFMFFDMWTDYEGFLDIIRHSWQGYIHGTAQYRLCKRLKRLKVPLKTLNSEH 40
           G   + ++ F FFDMW D++ F+ +++  W     G   Y+LC +L++LK  LK  N  H
Sbjct: 613 GNDQNKKKPFRFFDMWMDHDEFMPLVKKVWDQNSRGCPMYQLCCKLRKLKQELKLFNMAH 672

Query: 39  FSHISSRARTAR 4
           FS+IS R R A+
Sbjct: 673 FSNISDRVRDAK 684



 Score = 33.5 bits (75), Expect(2) = 2e-13
 Identities = 24/54 (44%), Positives = 30/54 (55%), Gaps = 7/54 (12%)
 Frame = -3

Query: 373 GFFYTWTN----NSVWSKLDRVLINDC*VQNNL--PVSTI-FLPPCCLDHCPSV 233
           G  YTW+N    N +  KLDRVL+N+   + NL  P+S   FLP    DH P V
Sbjct: 558 GMHYTWSNQCPENLIMRKLDRVLVNE---KWNLKFPLSEARFLPSGMSDHSPMV 608


>ref|XP_002332412.1| predicted protein [Populus trichocarpa] gi|222832345|gb|EEE70822.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score = 62.0 bits (149), Expect(2) = 1e-12
 Identities = 26/72 (36%), Positives = 42/72 (58%)
 Frame = -1

Query: 219 GGSDSGRRSFMFFDMWTDYEGFLDIIRHSWQGYIHGTAQYRLCKRLKRLKVPLKTLNSEH 40
           G   + ++ F FFDMW D++ F+ +++  W     G   Y+LC +L++ K  LK  N  H
Sbjct: 236 GNDQNIKKPFRFFDMWMDHDEFMPLVKKVWDQNSGGCPMYQLCCKLRKQKQELKLFNMAH 295

Query: 39  FSHISSRARTAR 4
           FS+IS R + A+
Sbjct: 296 FSNISDRVKDAK 307



 Score = 35.4 bits (80), Expect(2) = 1e-12
 Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
 Frame = -3

Query: 373 GFFYTWTN----NSVWSKLDRVLINDC*VQNNLPVSTI-FLPPCCLDHCPSV 233
           G  YTW+N    N +  KLDRVL+N+     N P+S   FLP    DH P V
Sbjct: 181 GMHYTWSNQCPENLIMRKLDRVLVNEK-WNLNFPLSEARFLPSGMSDHSPMV 231


>emb|CAN76142.1| hypothetical protein VITISV_007730 [Vitis vinifera]
          Length = 728

 Score = 59.7 bits (143), Expect(2) = 9e-10
 Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
 Frame = -1

Query: 219 GGSDSGRRSFMFFDMWTDYEGFLDIIRHSWQGY-IHGTAQYRLCKRLKRLKVPLKTLNSE 43
           GG   G   F F +MW   EGF D++R  WQG  + G+A YRL  ++K +K  LK  N E
Sbjct: 192 GGIRRGPTPFRFENMWLKVEGFQDVVRAWWQGIDVRGSASYRLAXKMKEIKKRLKVXNKE 251

Query: 42  HFSHISSRARTARE 1
            F  + +   TA E
Sbjct: 252 VFGRLETNKATALE 265



 Score = 28.1 bits (61), Expect(2) = 9e-10
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
 Frame = -3

Query: 364 YTWT---NNSVWSKLDRVLINDC*VQNNLPVSTIFLPPCCLDHCPSV 233
           +TW    NN VW++LDR L++   ++     + I L     DH P V
Sbjct: 142 FTWNGGLNNQVWARLDRFLVSPTWLEMFNGATQIRLSRPISDHFPIV 188


>emb|CAN63923.1| hypothetical protein VITISV_004023 [Vitis vinifera]
          Length = 1081

 Score = 57.4 bits (137), Expect(2) = 2e-09
 Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
 Frame = -1

Query: 219 GGS-DSGRRSFMFFDMWTDYEGFLDIIRHSWQG-YIHGTAQYRLCKRLKRLKVPLKTLNS 46
           GGS   G   F F +MW   EGF D+IR+ WQG  + G+A +RL ++LK++K  LK  N 
Sbjct: 636 GGSWRRGPAPFRFENMWFKVEGFKDLIRNWWQGTEVRGSASFRLSEKLKKVKQKLKVWNR 695

Query: 45  EHFSHISSRARTA 7
           E F ++ S    A
Sbjct: 696 EEFGNLESNKEAA 708



 Score = 28.9 bits (63), Expect(2) = 2e-09
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = -3

Query: 373 GFFYTWT---NNSVWSKLDRVLINDC*VQNNLPVSTIFLPPCCLDHCP 239
           G  +TWT   NN   ++LDR L++ C +     VS   LP    DH P
Sbjct: 584 GGAFTWTGGLNNMSKARLDRFLVSPCWLDQFSRVSQRRLPRPISDHFP 631


>ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|222874272|gb|EEF11403.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score = 48.1 bits (113), Expect(2) = 6e-09
 Identities = 26/72 (36%), Positives = 34/72 (47%)
 Frame = -1

Query: 219 GGSDSGRRSFMFFDMWTDYEGFLDIIRHSWQGYIHGTAQYRLCKRLKRLKVPLKTLNSEH 40
           G   + ++ F FFDMW D                 G   Y+LC  LK+LK  LK  N  H
Sbjct: 220 GNDQNIKKPFRFFDMWMDQNS-------------GGCPMYQLCCNLKKLKQELKLFNMAH 266

Query: 39  FSHISSRARTAR 4
           FS+IS R + A+
Sbjct: 267 FSNISDRVKDAK 278



 Score = 37.0 bits (84), Expect(2) = 6e-09
 Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
 Frame = -3

Query: 373 GFFYTWTN----NSVWSKLDRVLINDC*VQNNLPVSTI-FLPPCCLDHCPSV 233
           G  YTW+N    N +  KLDRVL+N+     N P+S + FLP    DH P V
Sbjct: 165 GMHYTWSNQCPENLIMRKLDRVLVNEK-WNLNFPLSEVRFLPSGISDHSPMV 215


Top