BLASTX nr result
ID: Cephaelis21_contig00040992
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00040992
(553 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI22025.3| unnamed protein product [Vitis vinifera] 252 3e-65
ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containi... 252 3e-65
ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containi... 241 4e-62
ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containi... 225 3e-57
ref|XP_002514539.1| pentatricopeptide repeat-containing protein,... 225 4e-57
>emb|CBI22025.3| unnamed protein product [Vitis vinifera]
Length = 489
Score = 252 bits (643), Expect = 3e-65
Identities = 124/184 (67%), Positives = 149/184 (80%)
Frame = +1
Query: 1 IITAGCLKDKFVRNHLLNAYSKMGQLETAVSLFDKMPKRNTMSYNILIGSFIQNGDLDTA 180
IIT+GC DKF+ NHLLN YSK GQL+TA++LF MP++N MS NILI + ++GD TA
Sbjct: 78 IITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTA 137
Query: 181 FKLFDEMGERNLATWNAMIVGLVQHEFNEDGLSLFSQMHKLGFLPDAFTLGSVFRGCAGL 360
K+FDEM ERN+ATWNAM+ GL+Q EFNE+GL LFS+M++LGFLPD F LGSV RGCAGL
Sbjct: 138 RKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGL 197
Query: 361 KDLNTGRQVHGYVVKSGFEWHLVVGSSLAHMYMRSGSLREGEKVIRMMPVSSVPACNTLI 540
+ L GRQVHGYV K GFE++LVV SSLAHMYM+ GSL EGE++IR MP +V A NTLI
Sbjct: 198 RALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLI 257
Query: 541 AGRA 552
AGRA
Sbjct: 258 AGRA 261
Score = 75.9 bits (185), Expect = 4e-12
Identities = 52/182 (28%), Positives = 83/182 (45%), Gaps = 5/182 (2%)
Frame = +1
Query: 13 GCLKDKFVRNHLLNAYSKMGQLETAVSLFDKMPKRNTMSYNILIGS-----FIQNGDLDT 177
G L D+F +L + + L + + K +N+++ S +++ G L
Sbjct: 179 GFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCG-FEFNLVVVSSLAHMYMKCGSLGE 237
Query: 178 AFKLFDEMGERNLATWNAMIVGLVQHEFNEDGLSLFSQMHKLGFLPDAFTLGSVFRGCAG 357
+L M +N+ WN +I G Q+ + E+ L ++ M GF PD T SV C+
Sbjct: 238 GERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSE 297
Query: 358 LKDLNTGRQVHGYVVKSGFEWHLVVGSSLAHMYMRSGSLREGEKVIRMMPVSSVPACNTL 537
L L G+Q+H V+K+G + V SSL MY R G L KV V +++
Sbjct: 298 LATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSM 357
Query: 538 IA 543
IA
Sbjct: 358 IA 359
>ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 252 bits (643), Expect = 3e-65
Identities = 124/184 (67%), Positives = 149/184 (80%)
Frame = +1
Query: 1 IITAGCLKDKFVRNHLLNAYSKMGQLETAVSLFDKMPKRNTMSYNILIGSFIQNGDLDTA 180
IIT+GC DKF+ NHLLN YSK GQL+TA++LF MP++N MS NILI + ++GD TA
Sbjct: 78 IITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTA 137
Query: 181 FKLFDEMGERNLATWNAMIVGLVQHEFNEDGLSLFSQMHKLGFLPDAFTLGSVFRGCAGL 360
K+FDEM ERN+ATWNAM+ GL+Q EFNE+GL LFS+M++LGFLPD F LGSV RGCAGL
Sbjct: 138 RKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGL 197
Query: 361 KDLNTGRQVHGYVVKSGFEWHLVVGSSLAHMYMRSGSLREGEKVIRMMPVSSVPACNTLI 540
+ L GRQVHGYV K GFE++LVV SSLAHMYM+ GSL EGE++IR MP +V A NTLI
Sbjct: 198 RALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLI 257
Query: 541 AGRA 552
AGRA
Sbjct: 258 AGRA 261
Score = 75.9 bits (185), Expect = 4e-12
Identities = 52/182 (28%), Positives = 83/182 (45%), Gaps = 5/182 (2%)
Frame = +1
Query: 13 GCLKDKFVRNHLLNAYSKMGQLETAVSLFDKMPKRNTMSYNILIGS-----FIQNGDLDT 177
G L D+F +L + + L + + K +N+++ S +++ G L
Sbjct: 179 GFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCG-FEFNLVVVSSLAHMYMKCGSLGE 237
Query: 178 AFKLFDEMGERNLATWNAMIVGLVQHEFNEDGLSLFSQMHKLGFLPDAFTLGSVFRGCAG 357
+L M +N+ WN +I G Q+ + E+ L ++ M GF PD T SV C+
Sbjct: 238 GERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSE 297
Query: 358 LKDLNTGRQVHGYVVKSGFEWHLVVGSSLAHMYMRSGSLREGEKVIRMMPVSSVPACNTL 537
L L G+Q+H V+K+G + V SSL MY R G L KV V +++
Sbjct: 298 LATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSM 357
Query: 538 IA 543
IA
Sbjct: 358 IA 359
>ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 241 bits (616), Expect = 4e-62
Identities = 117/184 (63%), Positives = 147/184 (79%)
Frame = +1
Query: 1 IITAGCLKDKFVRNHLLNAYSKMGQLETAVSLFDKMPKRNTMSYNILIGSFIQNGDLDTA 180
IIT+G KDKF+ NHLLN YSK+GQ ++++ LF MP+RN MS+NILI ++Q GDL++A
Sbjct: 88 IITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLGDLESA 147
Query: 181 FKLFDEMGERNLATWNAMIVGLVQHEFNEDGLSLFSQMHKLGFLPDAFTLGSVFRGCAGL 360
KLFDEM ERN+ATWNAMI GL Q EFN+ LSLF +M+ LGFLPD FTLGSV RGCAGL
Sbjct: 148 QKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGL 207
Query: 361 KDLNTGRQVHGYVVKSGFEWHLVVGSSLAHMYMRSGSLREGEKVIRMMPVSSVPACNTLI 540
+ L G++VH ++K GFE VVGSSLAHMY++SGSL +GEK+I+ MP+ +V A NTLI
Sbjct: 208 RSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLI 267
Query: 541 AGRA 552
AG+A
Sbjct: 268 AGKA 271
Score = 79.0 bits (193), Expect = 5e-13
Identities = 43/113 (38%), Positives = 59/113 (52%)
Frame = +1
Query: 151 FIQNGDLDTAFKLFDEMGERNLATWNAMIVGLVQHEFNEDGLSLFSQMHKLGFLPDAFTL 330
+I++G L KL M R + WN +I G Q+ E+ L+ ++ M GF PD T
Sbjct: 239 YIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITF 298
Query: 331 GSVFRGCAGLKDLNTGRQVHGYVVKSGFEWHLVVGSSLAHMYMRSGSLREGEK 489
SV C+ L L G+Q+H V+K+G L V SSL MY RSG L + K
Sbjct: 299 VSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIK 351
Score = 54.7 bits (130), Expect = 1e-05
Identities = 50/176 (28%), Positives = 77/176 (43%), Gaps = 9/176 (5%)
Frame = +1
Query: 10 AGCLKDKFVRNHLLNAYSKMGQLETAVSLFDKMPKRNTMSYNILIGSFI----QNGDLDT 177
AG DK +L+A S++ L + ++ K S ++ S I ++G L+
Sbjct: 289 AGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLED 348
Query: 178 AFKLFDEMGERNLATWNAMIVGLVQHEFNEDGLSLFSQMHKLGFLPDAFTLGSVFRGCA- 354
+ K F + ++ W++MI H E+ L LF QM L + T S+ C+
Sbjct: 349 SIKAFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSH 408
Query: 355 -GLKDLNT---GRQVHGYVVKSGFEWHLVVGSSLAHMYMRSGSLREGEKVIRMMPV 510
GLK+ T V Y +K E + V L R+G L E E +IR MPV
Sbjct: 409 SGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLG----RAGRLEEAEGMIRSMPV 460
>ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Glycine max]
Length = 674
Score = 225 bits (574), Expect = 3e-57
Identities = 107/184 (58%), Positives = 144/184 (78%)
Frame = +1
Query: 1 IITAGCLKDKFVRNHLLNAYSKMGQLETAVSLFDKMPKRNTMSYNILIGSFIQNGDLDTA 180
I T+GC DKF+ NHLLN YSK G+L+ AV+LFD+MP+RN MS NI+I +++ G+L++A
Sbjct: 95 IFTSGCSSDKFISNHLLNLYSKFGELQAAVALFDRMPRRNIMSCNIMIKAYLGMGNLESA 154
Query: 181 FKLFDEMGERNLATWNAMIVGLVQHEFNEDGLSLFSQMHKLGFLPDAFTLGSVFRGCAGL 360
LFDEM +RN+ATWNAM+ GL + E NE+ L LFS+M++L F+PD ++LGSV RGCA L
Sbjct: 155 KNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSRMNELSFMPDEYSLGSVLRGCAHL 214
Query: 361 KDLNTGRQVHGYVVKSGFEWHLVVGSSLAHMYMRSGSLREGEKVIRMMPVSSVPACNTLI 540
L G+QVH YV+K GFE +LVVG SLAHMYM++GS+ +GE+VI MP S+ A NTL+
Sbjct: 215 GALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAGSMHDGERVINWMPDCSLVAWNTLM 274
Query: 541 AGRA 552
+G+A
Sbjct: 275 SGKA 278
Score = 66.2 bits (160), Expect = 3e-09
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 5/142 (3%)
Frame = +1
Query: 133 NILIGS-----FIQNGDLDTAFKLFDEMGERNLATWNAMIVGLVQHEFNEDGLSLFSQMH 297
N+++G +++ G + ++ + M + +L WN ++ G Q + E L + M
Sbjct: 235 NLVVGCSLAHMYMKAGSMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMK 294
Query: 298 KLGFLPDAFTLGSVFRGCAGLKDLNTGRQVHGYVVKSGFEWHLVVGSSLAHMYMRSGSLR 477
GF PD T SV C+ L L G+Q+H VK+G + V SSL MY R G L+
Sbjct: 295 MAGFRPDKITFVSVISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQ 354
Query: 478 EGEKVIRMMPVSSVPACNTLIA 543
+ K V +++IA
Sbjct: 355 DSIKTFLECKERDVVLWSSMIA 376
Score = 55.8 bits (133), Expect = 4e-06
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 2/128 (1%)
Frame = +1
Query: 139 LIGSFIQNGDLDTAFKLFDEMGERNLATWNAMIVGLVQHEFNEDGLSLFSQMHKLGFLPD 318
L+ + + G L + K F E ER++ W++MI H E+ + LF++M + +
Sbjct: 343 LVSMYSRCGCLQDSIKTFLECKERDVVLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGN 402
Query: 319 AFTLGSVFRGCA--GLKDLNTGRQVHGYVVKSGFEWHLVVGSSLAHMYMRSGSLREGEKV 492
T S+ C+ GLKD G V K G + L + L + RSG L E E +
Sbjct: 403 EITFLSLLYACSHCGLKDKGLGL-FDMMVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAM 461
Query: 493 IRMMPVSS 516
IR MPV +
Sbjct: 462 IRSMPVKA 469
>ref|XP_002514539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223546143|gb|EEF47645.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 332
Score = 225 bits (573), Expect = 4e-57
Identities = 108/165 (65%), Positives = 137/165 (83%)
Frame = +1
Query: 58 YSKMGQLETAVSLFDKMPKRNTMSYNILIGSFIQNGDLDTAFKLFDEMGERNLATWNAMI 237
YSK+G+L+TA+ LF+ MP RN MS NILI ++I +G+LD+A LFDEM ERN+ATWNA++
Sbjct: 2 YSKIGELQTALLLFNSMPMRNIMSCNILINAYIHSGELDSARNLFDEMPERNVATWNAVV 61
Query: 238 VGLVQHEFNEDGLSLFSQMHKLGFLPDAFTLGSVFRGCAGLKDLNTGRQVHGYVVKSGFE 417
GL+Q E NE+GL+LF M++LGFLPD +TLGSV RGCAGLK + GRQVH YVVK GFE
Sbjct: 62 AGLIQFEINEEGLNLFRDMYELGFLPDEYTLGSVLRGCAGLKSMYAGRQVHCYVVKCGFE 121
Query: 418 WHLVVGSSLAHMYMRSGSLREGEKVIRMMPVSSVPACNTLIAGRA 552
++LVVGSSLAHMYM+SGSL EGE+VI+ MP ++ A NTLIAG++
Sbjct: 122 FNLVVGSSLAHMYMKSGSLSEGERVIKSMPSRNIVAWNTLIAGKS 166
Score = 86.7 bits (213), Expect = 2e-15
Identities = 44/126 (34%), Positives = 69/126 (54%), Gaps = 5/126 (3%)
Frame = +1
Query: 130 YNILIGS-----FIQNGDLDTAFKLFDEMGERNLATWNAMIVGLVQHEFNEDGLSLFSQM 294
+N+++GS ++++G L ++ M RN+ WN +I G Q+ +E+ L L++ M
Sbjct: 122 FNLVVGSSLAHMYMKSGSLSEGERVIKSMPSRNIVAWNTLIAGKSQNGHSEEVLDLYNMM 181
Query: 295 HKLGFLPDAFTLGSVFRGCAGLKDLNTGRQVHGYVVKSGFEWHLVVGSSLAHMYMRSGSL 474
+GF PD T SV C+ L L G+Q+H V+K+G + V SSL MY R G L
Sbjct: 182 RIMGFRPDKITFASVISSCSELTTLGQGQQIHAEVIKAGASSVVAVTSSLISMYSRCGCL 241
Query: 475 REGEKV 492
+ KV
Sbjct: 242 EDSVKV 247